RNA id: AMCG00009468



Basic Information


Item Value
RNA id AMCG00009468
length 462
RNA type mRNA
GC content 0.53
exon number 6
gene id AMCG00009468
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38655785 ~ 38729386 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCAGAGGCCCGACTGACTTTTGATGCCATGGTAGAGTATCTGGTGAAGCATGGCCTGCAGGATGAAGGCCTGTTCAGAGTCTATGGGTCTGTGACGAGTGGGAAGCTGCTGAAGGGCCAGACAGTGGACCTGGAGACGGAGGGGGACGTCCTCATCGTGGCTTCAGTGTTGAAGCTGTTCCTCAGGGATCTCCCCAAGGCTCTGATTCCAGACCACTCGGACACTGTCAGCGCCTTCAAAGCAAAGAATCACAAGAAACACTGCCACGACAGGCAGCAGAAAGACTGGGATCGCCCTCTGTGCATGCGCAAtaACTTTGAAGCTTCACCAATGATTGAAATCTCTGAGAACTTGGAAGATCCCCTCGACACAGCTGGAGTTGGCACAGACAGCACCTTGGGGAGCTCAGTTACAGCGTGCAAGAAGTTGATGTTGAAGAGCAACGACTCAGACGGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU71465 lncRNA upstream 22434 38633097 ~ 38633351 (+) True G57164
TU71462 lncRNA upstream 27650 38627919 ~ 38628135 (+) True G57161
TU71304 lncRNA upstream 375306 38202794 ~ 38280479 (+) True G57036
TU71255 lncRNA upstream 521819 38130082 ~ 38133966 (+) True G56995
TU71241 lncRNA upstream 587632 38063790 ~ 38068153 (+) True G56982
TU71480 lncRNA downstream 27994 38757380 ~ 38834945 (+) True G57175
TU71626 lncRNA downstream 573951 39303337 ~ 39306230 (+) True G57286
TU71627 lncRNA downstream 577102 39306488 ~ 39306774 (+) True G57287
TU71673 lncRNA downstream 730012 39459398 ~ 39459676 (+) True G57329
TU71734 lncRNA downstream 1077197 39806583 ~ 39806928 (+) True G57378
AMCG00009464 mRNA upstream 39947 38614820 ~ 38615838 (+) True AMCG00009464
AMCG00009463 mRNA upstream 72354 38541989 ~ 38583431 (+) True AMCG00009463
AMCG00009462 mRNA upstream 144763 38481113 ~ 38511022 (+) True AMCG00009462
AMCG00009456 mRNA upstream 181746 38467267 ~ 38474039 (+) True AMCG00009456
AMCG00009457 mRNA upstream 300815 38334048 ~ 38354970 (+) True AMCG00009457
AMCG00009465 mRNA downstream 10934 38740320 ~ 38751025 (+) True AMCG00009465
AMCG00009466 mRNA downstream 34385 38763771 ~ 38775610 (+) True AMCG00009466
AMCG00009469 mRNA downstream 84649 38814035 ~ 38817666 (+) True AMCG00009469
AMCG00009473 mRNA downstream 112570 38841956 ~ 38843311 (+) True AMCG00009473
AMCG00009474 mRNA downstream 140101 38869487 ~ 38900537 (+) True AMCG00009474
TU71381 other upstream 198193 38442255 ~ 38457592 (+) True G57105
TU71113 other upstream 1039502 37610343 ~ 37616283 (+) False AMCG00009428
TU70945 other upstream 1288114 37360101 ~ 37367671 (+) True AMCG00009405
TU70668 other upstream 3266458 35388914 ~ 35389327 (+) True G56536
TU70456 other upstream 4636970 34015670 ~ 34018815 (+) True G56369
TU71670 other downstream 705514 39434900 ~ 39436995 (+) True AMCG00009480
TU71802 other downstream 1218620 39948006 ~ 39949200 (+) True G57430
TU71881 other downstream 1372997 40102383 ~ 40104948 (+) False AMCG00009516
TU72035 other downstream 2261416 40990802 ~ 40994659 (+) True G57604
TU72303 other downstream 3306632 42036018 ~ 42078241 (+) True G57830

Expression Profile