RNA id: AMCG00009473



Basic Information


Item Value
RNA id AMCG00009473
length 408
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00009473
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38841956 ~ 38843311 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACCATTCTACATTGCAGGCCCAATGTGTGTGCGGAGCGGGAGCTGGCCATGCTGGGACATAGGCAGCCGTGTGTCCAGGCCTTCACACGAATGGTGAAAATATGGAAACAGGGCTGTAGCAGTCAGAGGTGGTGTGCGGGATATGAAAGAAGGACTGGCTATTACACAGCATACAGGCAGGTTTACAACATGGACATCCACATGGTGTACAAGTGCTGCCCTGGATGGACACAGCAGAATGACGAGAGGGGCTGTCTACACCCGGTGTGCTCTATGGGGACCTGTTTCAATGGTGGGAGGTGTGGGAACACGGGGTCCCAGGTGTGCCAGTGCCCTTCGGGGTTCCAGGGGTCCCGCTGCCAGTATGGTGAGTGCCATGCCGTACCACATGCAGCAGTTGTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU71480 lncRNA upstream 7011 38757380 ~ 38834945 (+) True G57175
TU71465 lncRNA upstream 208605 38633097 ~ 38633351 (+) True G57164
TU71462 lncRNA upstream 213821 38627919 ~ 38628135 (+) True G57161
TU71304 lncRNA upstream 561477 38202794 ~ 38280479 (+) True G57036
TU71255 lncRNA upstream 707990 38130082 ~ 38133966 (+) True G56995
TU71626 lncRNA downstream 460026 39303337 ~ 39306230 (+) True G57286
TU71627 lncRNA downstream 463177 39306488 ~ 39306774 (+) True G57287
TU71673 lncRNA downstream 616087 39459398 ~ 39459676 (+) True G57329
TU71734 lncRNA downstream 963272 39806583 ~ 39806928 (+) True G57378
TU71769 lncRNA downstream 1031570 39874881 ~ 39875170 (+) True G57401
AMCG00009469 mRNA upstream 24290 38814035 ~ 38817666 (+) True AMCG00009469
AMCG00009466 mRNA upstream 66346 38763771 ~ 38775610 (+) True AMCG00009466
AMCG00009465 mRNA upstream 90931 38740320 ~ 38751025 (+) True AMCG00009465
AMCG00009468 mRNA upstream 112570 38655785 ~ 38729386 (+) True AMCG00009468
AMCG00009464 mRNA upstream 226118 38614820 ~ 38615838 (+) True AMCG00009464
AMCG00009474 mRNA downstream 26176 38869487 ~ 38900537 (+) True AMCG00009474
AMCG00009477 mRNA downstream 290543 39133854 ~ 39155094 (+) True AMCG00009477
AMCG00009479 mRNA downstream 433780 39277091 ~ 39302785 (+) True AMCG00009479
AMCG00009484 mRNA downstream 534938 39378249 ~ 39393565 (+) True AMCG00009484
AMCG00009483 mRNA downstream 550258 39393569 ~ 39401188 (+) True AMCG00009483
TU71381 other upstream 384364 38442255 ~ 38457592 (+) True G57105
TU71113 other upstream 1225673 37610343 ~ 37616283 (+) False AMCG00009428
TU70945 other upstream 1474285 37360101 ~ 37367671 (+) True AMCG00009405
TU70668 other upstream 3452629 35388914 ~ 35389327 (+) True G56536
TU70456 other upstream 4823141 34015670 ~ 34018815 (+) True G56369
TU71670 other downstream 591589 39434900 ~ 39436995 (+) True AMCG00009480
TU71802 other downstream 1104695 39948006 ~ 39949200 (+) True G57430
TU71881 other downstream 1259072 40102383 ~ 40104948 (+) False AMCG00009516
TU72035 other downstream 2147491 40990802 ~ 40994659 (+) True G57604
TU72303 other downstream 3192707 42036018 ~ 42078241 (+) True G57830

Expression Profile