Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009498 |
| length | 1035 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 12 |
| gene id | AMCG00009498 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 39865728 ~ 39872722 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71734 | lncRNA | upstream | 58800 | 39806583 ~ 39806928 (+) | True | G57378 |
| TU71673 | lncRNA | upstream | 406052 | 39459398 ~ 39459676 (+) | True | G57329 |
| TU71627 | lncRNA | upstream | 558954 | 39306488 ~ 39306774 (+) | True | G57287 |
| TU71626 | lncRNA | upstream | 559498 | 39303337 ~ 39306230 (+) | True | G57286 |
| TU71480 | lncRNA | upstream | 1030783 | 38757380 ~ 38834945 (+) | True | G57175 |
| TU71769 | lncRNA | downstream | 2159 | 39874881 ~ 39875170 (+) | True | G57401 |
| TU71800 | lncRNA | downstream | 68500 | 39941222 ~ 39943036 (+) | True | G57428 |
| TU71839 | lncRNA | downstream | 157824 | 40030546 ~ 40033333 (+) | True | G57457 |
| TU71932 | lncRNA | downstream | 286687 | 40159409 ~ 40159626 (+) | True | G57523 |
| TU71954 | lncRNA | downstream | 466660 | 40339382 ~ 40343381 (+) | True | G57544 |
| AMCG00009495 | mRNA | upstream | 2547 | 39845409 ~ 39863181 (+) | True | AMCG00009495 |
| AMCG00009497 | mRNA | upstream | 21864 | 39839181 ~ 39843864 (+) | True | AMCG00009497 |
| AMCG00009499 | mRNA | upstream | 28091 | 39827306 ~ 39837637 (+) | True | AMCG00009499 |
| AMCG00009496 | mRNA | upstream | 50950 | 39807424 ~ 39814778 (+) | True | AMCG00009496 |
| AMCG00009488 | mRNA | upstream | 299442 | 39560727 ~ 39566286 (+) | True | AMCG00009488 |
| AMCG00009504 | mRNA | downstream | 11280 | 39884002 ~ 39922108 (+) | True | AMCG00009504 |
| AMCG00009506 | mRNA | downstream | 50212 | 39922934 ~ 39930133 (+) | True | AMCG00009506 |
| AMCG00009505 | mRNA | downstream | 57424 | 39930146 ~ 39938281 (+) | True | AMCG00009505 |
| AMCG00009503 | mRNA | downstream | 94575 | 39967297 ~ 39982047 (+) | True | AMCG00009503 |
| AMCG00009510 | mRNA | downstream | 149359 | 40022081 ~ 40025439 (+) | True | AMCG00009510 |
| TU71670 | other | upstream | 428733 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU71381 | other | upstream | 1408136 | 38442255 ~ 38457592 (+) | True | G57105 |
| TU71113 | other | upstream | 2249445 | 37610343 ~ 37616283 (+) | False | AMCG00009428 |
| TU70945 | other | upstream | 2498057 | 37360101 ~ 37367671 (+) | True | AMCG00009405 |
| TU70668 | other | upstream | 4476401 | 35388914 ~ 35389327 (+) | True | G56536 |
| TU71802 | other | downstream | 75284 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71881 | other | downstream | 229661 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU72035 | other | downstream | 1118080 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU72303 | other | downstream | 2163296 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72919 | other | downstream | 4060230 | 43932952 ~ 43935762 (+) | True | G58324 |
