RNA id: AMCG00009565



Basic Information


Item Value
RNA id AMCG00009565
length 288
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00009565
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41606797 ~ 41609389 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGaTCAGCCGGGTGCTGAAGCCAGGAGGGCGTTTCATCTCCGTCACCTTTGCCCAGCCTCACTTCCGGAAGCGCCTCTACGCACAAGAGCAGTTCGGCTGGTCGATCAGACACTGGAGCTACGGAGGAGGCTTCCAGTATTTCTTCTACGTCTTGACAAAGGGAGAGGAACTGAGCCCAGAGGACCGAGCTCTGGAGAGGAGTCCGGCCAAGAGAGACACGCCCTCGATGGCTGCCTTTCTGGAGGACTCTGACCCAGAAGACTACCTCAACCGCATCACTATTTAA

Function


GO: NA

KEGG:

id description
K22857 EEF1AKMT4; EEF1A lysine methyltransferase 4

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU72031 lncRNA downstream 673587 40932965 ~ 40933210 (-) True G57600
TU72026 lncRNA downstream 829713 40721431 ~ 40777084 (-) True G57596
TU71955 lncRNA downstream 1263318 40339347 ~ 40343479 (-) True G57545
TU71933 lncRNA downstream 1447189 40159397 ~ 40159608 (-) True G57524
TU71768 lncRNA downstream 1732568 39873971 ~ 39874229 (-) True G57400
TU72239 lncRNA upstream 205212 41814601 ~ 41815807 (-) False AMCG00009571
TU72308 lncRNA upstream 431810 42041199 ~ 42056128 (-) False AMCG00009582
TU72332 lncRNA upstream 563869 42173258 ~ 42175707 (-) True G57858
TU72348 lncRNA upstream 595881 42205270 ~ 42205559 (-) True G57873
TU72494 lncRNA upstream 858796 42468185 ~ 42468759 (-) True G57982
AMCG00009560 mRNA downstream 22336 41574140 ~ 41584461 (-) True AMCG00009560
AMCG00009559 mRNA downstream 34630 41570613 ~ 41572167 (-) True AMCG00009559
AMCG00009558 mRNA downstream 44650 41544905 ~ 41562147 (-) True AMCG00009558
AMCG00009561 mRNA downstream 64797 41515488 ~ 41542000 (-) True AMCG00009561
AMCG00009557 mRNA downstream 105028 41498111 ~ 41501769 (-) True AMCG00009557
AMCG00009566 mRNA upstream 39893 41649282 ~ 41652922 (-) True AMCG00009566
AMCG00009567 mRNA upstream 75123 41684512 ~ 41700757 (-) True AMCG00009567
AMCG00009572 mRNA upstream 178224 41787613 ~ 41788999 (-) True AMCG00009572
AMCG00009571 mRNA upstream 205170 41814559 ~ 41826934 (-) True AMCG00009571
AMCG00009570 mRNA upstream 235631 41845020 ~ 41849637 (-) True AMCG00009570
TU71924 other downstream 1449326 40148725 ~ 40157471 (-) False AMCG00009521
TU71520 other downstream 2769233 38835316 ~ 38837564 (-) False AMCG00009472
TU71449 other downstream 3023977 38580285 ~ 38582820 (-) True G57155
TU70990 other downstream 4386721 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 5734200 35872123 ~ 35872597 (-) True G56568
TU72548 other upstream 1059738 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 1873032 43482421 ~ 43945297 (-) True G58333
TU73015 other upstream 2380122 43989511 ~ 43995654 (-) True AMCG00009672
TU73231 other upstream 2898864 44508253 ~ 44512249 (-) False AMCG00009697
TU73235 other upstream 2932505 44541894 ~ 44542809 (-) True G58584

Expression Profile