RNA id: AMCG00009577



Basic Information


Item Value
RNA id AMCG00009577
length 273
RNA type mRNA
GC content 0.62
exon number 3
gene id AMCG00009577
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 41951667 ~ 41960909 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGCAAGGTTACATCGGAGTCGGGGCTTGTCGAATGGCTCGGCAGCGCTGTGGAGTTTTACCCCAAGAACCAGAGGGGCAgtggggcgggggtgggggcaggAGGAGCAGAGACCAACCATGCGGCAAGCTTTGGCGCCACCCTGGAGGAGCTGCGGGGGATCATGGAGCTTCGGGGAGGGGAGGCCATCCAGAAAATCCAGGACAGCTACGGCGACGTCAGCGTCCTCTGTCGCCGGTTAAAATCCTCCCCCACTGAAGTGCAGACGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU72251 lncRNA upstream 112201 41839165 ~ 41839466 (+) True G57792
TU72233 lncRNA upstream 133872 41815921 ~ 41817795 (+) True G57775
TU72228 lncRNA upstream 201523 41749555 ~ 41750144 (+) True G57770
TU72199 lncRNA upstream 352545 41596229 ~ 41599122 (+) True AMCG00009563
TU72136 lncRNA upstream 451449 41499964 ~ 41500218 (+) True G57690
TU72317 lncRNA downstream 124370 42085279 ~ 42088145 (+) True G57843
TU72439 lncRNA downstream 441326 42402235 ~ 42402452 (+) True G57940
TU72446 lncRNA downstream 454681 42415590 ~ 42418109 (+) True G57945
TU72447 lncRNA downstream 457232 42418141 ~ 42418505 (+) True G57946
TU72448 lncRNA downstream 457681 42418590 ~ 42420823 (+) True G57947
AMCG00009575 mRNA upstream 41549 41901833 ~ 41910118 (+) True AMCG00009575
AMCG00009569 mRNA upstream 107210 41832871 ~ 41844457 (+) True AMCG00009569
AMCG00009568 mRNA upstream 167130 41775209 ~ 41784537 (+) True AMCG00009568
AMCG00009564 mRNA upstream 267972 41678552 ~ 41683695 (+) True AMCG00009564
AMCG00009563 mRNA upstream 352543 41596308 ~ 41599124 (+) False AMCG00009563
AMCG00009579 mRNA downstream 18628 41979537 ~ 42029964 (+) True AMCG00009579
AMCG00009578 mRNA downstream 75109 42036018 ~ 42042211 (+) True AMCG00009578
AMCG00009581 mRNA downstream 114569 42075478 ~ 42078291 (+) True AMCG00009581
AMCG00009580 mRNA downstream 209437 42170346 ~ 42175700 (+) True AMCG00009580
AMCG00009588 mRNA downstream 232385 42193294 ~ 42211548 (+) True AMCG00009588
TU72035 other upstream 957008 40990802 ~ 40994659 (+) True G57604
TU71881 other upstream 1846719 40102383 ~ 40104948 (+) False AMCG00009516
TU71802 other upstream 2002467 39948006 ~ 39949200 (+) True G57430
TU71670 other upstream 2514672 39434900 ~ 39436995 (+) True AMCG00009480
TU71381 other upstream 3494075 38442255 ~ 38457592 (+) True G57105
TU72303 other downstream 75109 42036018 ~ 42078241 (+) True G57830
TU72919 other downstream 1972043 43932952 ~ 43935762 (+) True G58324
TU73161 other downstream 2425588 44386497 ~ 44387964 (+) False G58522
TU73232 other downstream 2606456 44567365 ~ 44570531 (+) True AMCG00009694
TU73244 other downstream 2623653 44584562 ~ 44599328 (+) False AMCG00009700

Expression Profile