RNA id: AMCG00009603


Basic Information

Item Value
RNA id AMCG00009603
length 201
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00009603
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42537228 ~ 42537555 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGAAGATGACTGTAGACCAGAGCTCGGGAGAGCACGGTGTGGTCTTCATGTCTTTGGAGACCTTTCTGGGAGGCCTGCCACCCAAGATGACAGAAACCATCTCCTCCACCTTTGCCCAACTCCCTCAGAAACTCATCTGGAGGCACTTAGGGAAGAGGCCCTCCACTCTGGGCAACAACATCCTCTTAGTCAAGTGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU72500 lncRNA downstream 59116 42477721 ~ 42478112 (-) True G57988
TU72494 lncRNA downstream 68469 42468185 ~ 42468759 (-) True G57982
TU72348 lncRNA downstream 331669 42205270 ~ 42205559 (-) True G57873
TU72332 lncRNA downstream 361521 42173258 ~ 42175707 (-) True G57858
TU72308 lncRNA downstream 481100 42041199 ~ 42056128 (-) False AMCG00009582
TU72510 lncRNA upstream 1884 42539439 ~ 42540113 (-) True G57998
TU72547 lncRNA upstream 111295 42648850 ~ 42673707 (-) False G58025
TU72563 lncRNA upstream 159342 42696897 ~ 42697133 (-) True G58039
TU72703 lncRNA upstream 469046 43006601 ~ 43010113 (-) True G58149
TU72704 lncRNA upstream 469046 43006601 ~ 43010065 (-) False G58149
AMCG00009601 mRNA downstream 19345 42510836 ~ 42517883 (-) True AMCG00009601
AMCG00009596 mRNA downstream 61264 42474886 ~ 42475964 (-) True AMCG00009596
AMCG00009597 mRNA downstream 93160 42435235 ~ 42444068 (-) True AMCG00009597
AMCG00009598 mRNA downstream 107241 42429603 ~ 42429987 (-) True AMCG00009598
AMCG00009599 mRNA downstream 107642 42424928 ~ 42429586 (-) True AMCG00009599
AMCG00009602 mRNA upstream 8073 42545628 ~ 42547223 (-) True AMCG00009602
AMCG00009612 mRNA upstream 62543 42600098 ~ 42607648 (-) True AMCG00009612
AMCG00009616 mRNA upstream 153153 42690708 ~ 42703202 (-) True AMCG00009616
AMCG00009615 mRNA upstream 185072 42722627 ~ 42739824 (-) True AMCG00009615
AMCG00009622 mRNA upstream 253740 42791295 ~ 42797463 (-) True AMCG00009622
TU71924 other downstream 2379757 40148725 ~ 40157471 (-) False AMCG00009521
TU71520 other downstream 3699664 38835316 ~ 38837564 (-) False AMCG00009472
TU71449 other downstream 3954408 38580285 ~ 38582820 (-) True G57155
TU70990 other downstream 5317152 37215960 ~ 37220076 (-) True G56800
TU70712 other downstream 6664631 35872123 ~ 35872597 (-) True G56568
TU72548 other upstream 131572 42669127 ~ 42673707 (-) True G58025
TU72928 other upstream 944866 43482421 ~ 43945297 (-) True G58333
TU73015 other upstream 1451956 43989511 ~ 43995654 (-) True AMCG00009672
TU73231 other upstream 1970698 44508253 ~ 44512249 (-) False AMCG00009697
TU73235 other upstream 2004339 44541894 ~ 44542809 (-) True G58584