Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009607 |
| length | 1239 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 8 |
| gene id | AMCG00009607 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 42642193 ~ 42649279 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0019013 | viral nucleocapsid | cellular_component |
| id | description |
|---|---|
| K14561 | IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72524 | lncRNA | upstream | 5740 | 42629539 ~ 42636453 (+) | True | G58008 |
| TU72499 | lncRNA | upstream | 164081 | 42477715 ~ 42478112 (+) | True | G57987 |
| TU72493 | lncRNA | upstream | 173591 | 42468308 ~ 42468602 (+) | True | G57981 |
| TU72470 | lncRNA | upstream | 207041 | 42432920 ~ 42435152 (+) | False | G57964 |
| TU72466 | lncRNA | upstream | 207069 | 42432877 ~ 42435124 (+) | True | G57964 |
| TU72671 | lncRNA | downstream | 288728 | 42938007 ~ 42938874 (+) | True | G58123 |
| TU72700 | lncRNA | downstream | 357322 | 43006601 ~ 43010002 (+) | False | G58148 |
| TU72699 | lncRNA | downstream | 357345 | 43006624 ~ 43010050 (+) | True | G58148 |
| TU72734 | lncRNA | downstream | 563431 | 43212710 ~ 43213028 (+) | True | G58178 |
| TU72753 | lncRNA | downstream | 600124 | 43249403 ~ 43249641 (+) | True | G58195 |
| AMCG00009611 | mRNA | upstream | 8555 | 42633435 ~ 42633638 (+) | True | AMCG00009611 |
| AMCG00009609 | mRNA | upstream | 10079 | 42629421 ~ 42632114 (+) | True | AMCG00009609 |
| AMCG00009610 | mRNA | upstream | 13476 | 42608497 ~ 42628717 (+) | True | AMCG00009610 |
| AMCG00009608 | mRNA | upstream | 42459 | 42596093 ~ 42599734 (+) | True | AMCG00009608 |
| AMCG00009605 | mRNA | upstream | 71254 | 42566620 ~ 42570939 (+) | True | AMCG00009605 |
| AMCG00009614 | mRNA | downstream | 14115 | 42663394 ~ 42665431 (+) | True | AMCG00009614 |
| AMCG00009613 | mRNA | downstream | 25949 | 42675228 ~ 42688453 (+) | True | AMCG00009613 |
| AMCG00009617 | mRNA | downstream | 58478 | 42707757 ~ 42722609 (+) | True | AMCG00009617 |
| AMCG00009618 | mRNA | downstream | 195857 | 42845136 ~ 42856980 (+) | True | AMCG00009618 |
| AMCG00009620 | mRNA | downstream | 213124 | 42862403 ~ 42862624 (+) | True | AMCG00009620 |
| TU72303 | other | upstream | 563952 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72035 | other | upstream | 1647534 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU71881 | other | upstream | 2537245 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU71802 | other | upstream | 2692993 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71670 | other | upstream | 3205198 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU72919 | other | downstream | 1283673 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU73161 | other | downstream | 1737218 | 44386497 ~ 44387964 (+) | False | G58522 |
| TU73232 | other | downstream | 1918086 | 44567365 ~ 44570531 (+) | True | AMCG00009694 |
| TU73244 | other | downstream | 1935283 | 44584562 ~ 44599328 (+) | False | AMCG00009700 |
| TU73251 | other | downstream | 1983471 | 44632750 ~ 44651967 (+) | True | G58600 |
