RNA id: AMCG00009611


Basic Information

Item Value
RNA id AMCG00009611
length 204
RNA type mRNA
GC content 0.59
exon number 1
gene id AMCG00009611
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42633435 ~ 42633638 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTCAGGGATGCCCAGTACTGGGTGGTTTGTGCTCCCCTCCCCGACCTCTGACCTCCGACCCCAACAACATGAACTCGAAAACACGGGGGCCAACCTGTAACCTGGGCTGCCCACACAGTGGAGCAACGACCAACCCAGCCAGCGAGGAGCTAGCGGCCACACCTTCCCTACTGCCCGAGCTCATCCAGATATGCAAATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU72499 lncRNA upstream 155323 42477715 ~ 42478112 (+) True G57987
TU72493 lncRNA upstream 164833 42468308 ~ 42468602 (+) True G57981
TU72470 lncRNA upstream 198283 42432920 ~ 42435152 (+) False G57964
TU72466 lncRNA upstream 198311 42432877 ~ 42435124 (+) True G57964
TU72449 lncRNA upstream 205387 42427842 ~ 42428048 (+) True G57948
TU72671 lncRNA downstream 304369 42938007 ~ 42938874 (+) True G58123
TU72700 lncRNA downstream 372963 43006601 ~ 43010002 (+) False G58148
TU72699 lncRNA downstream 372986 43006624 ~ 43010050 (+) True G58148
TU72734 lncRNA downstream 579072 43212710 ~ 43213028 (+) True G58178
TU72753 lncRNA downstream 615765 43249403 ~ 43249641 (+) True G58195
AMCG00009609 mRNA upstream 1321 42629421 ~ 42632114 (+) True AMCG00009609
AMCG00009610 mRNA upstream 4718 42608497 ~ 42628717 (+) True AMCG00009610
AMCG00009608 mRNA upstream 33701 42596093 ~ 42599734 (+) True AMCG00009608
AMCG00009605 mRNA upstream 62496 42566620 ~ 42570939 (+) True AMCG00009605
AMCG00009606 mRNA upstream 86716 42531717 ~ 42546719 (+) True AMCG00009606
AMCG00009607 mRNA downstream 8555 42642193 ~ 42649279 (+) True AMCG00009607
AMCG00009614 mRNA downstream 29756 42663394 ~ 42665431 (+) True AMCG00009614
AMCG00009613 mRNA downstream 41590 42675228 ~ 42688453 (+) True AMCG00009613
AMCG00009617 mRNA downstream 74119 42707757 ~ 42722609 (+) True AMCG00009617
AMCG00009618 mRNA downstream 211498 42845136 ~ 42856980 (+) True AMCG00009618
TU72303 other upstream 555194 42036018 ~ 42078241 (+) True G57830
TU72035 other upstream 1638776 40990802 ~ 40994659 (+) True G57604
TU71881 other upstream 2528487 40102383 ~ 40104948 (+) False AMCG00009516
TU71802 other upstream 2684235 39948006 ~ 39949200 (+) True G57430
TU71670 other upstream 3196440 39434900 ~ 39436995 (+) True AMCG00009480
TU72919 other downstream 1299314 43932952 ~ 43935762 (+) True G58324
TU73161 other downstream 1752859 44386497 ~ 44387964 (+) False G58522
TU73232 other downstream 1933727 44567365 ~ 44570531 (+) True AMCG00009694
TU73244 other downstream 1950924 44584562 ~ 44599328 (+) False AMCG00009700
TU73251 other downstream 1999112 44632750 ~ 44651967 (+) True G58600