Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009635 |
| length | 1303 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 12 |
| gene id | AMCG00009635 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 43267927 ~ 43273372 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K13119 | FAM50, XAP5; protein FAM50 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72753 | lncRNA | upstream | 18286 | 43249403 ~ 43249641 (+) | True | G58195 |
| TU72734 | lncRNA | upstream | 54899 | 43212710 ~ 43213028 (+) | True | G58178 |
| TU72699 | lncRNA | upstream | 257877 | 43006624 ~ 43010050 (+) | True | G58148 |
| TU72700 | lncRNA | upstream | 257925 | 43006601 ~ 43010002 (+) | False | G58148 |
| TU72671 | lncRNA | upstream | 329053 | 42938007 ~ 42938874 (+) | True | G58123 |
| TU72776 | lncRNA | downstream | 36488 | 43309860 ~ 43311062 (+) | True | G58215 |
| TU72773 | lncRNA | downstream | 45544 | 43318916 ~ 43324579 (+) | True | G58214 |
| TU72836 | lncRNA | downstream | 166027 | 43439399 ~ 43444317 (+) | False | AMCG00009647 |
| TU72871 | lncRNA | downstream | 404979 | 43678351 ~ 43680953 (+) | True | G58291 |
| TU72891 | lncRNA | downstream | 600409 | 43873781 ~ 43875723 (+) | True | G58304 |
| AMCG00009634 | mRNA | upstream | 1028 | 43258520 ~ 43266899 (+) | True | AMCG00009634 |
| AMCG00009639 | mRNA | upstream | 14865 | 43252202 ~ 43253062 (+) | True | AMCG00009639 |
| AMCG00009636 | mRNA | upstream | 54008 | 43189605 ~ 43213919 (+) | True | AMCG00009636 |
| AMCG00009633 | mRNA | upstream | 154977 | 43105479 ~ 43112950 (+) | True | AMCG00009633 |
| AMCG00009632 | mRNA | upstream | 215536 | 43051273 ~ 43052391 (+) | True | AMCG00009632 |
| AMCG00009640 | mRNA | downstream | 42256 | 43315628 ~ 43318501 (+) | True | AMCG00009640 |
| AMCG00009646 | mRNA | downstream | 143459 | 43416831 ~ 43424850 (+) | True | AMCG00009646 |
| AMCG00009647 | mRNA | downstream | 163618 | 43436990 ~ 43444420 (+) | True | AMCG00009647 |
| AMCG00009656 | mRNA | downstream | 398397 | 43671769 ~ 43720150 (+) | True | AMCG00009656 |
| AMCG00009654 | mRNA | downstream | 463225 | 43736597 ~ 43740863 (+) | True | AMCG00009654 |
| TU72303 | other | upstream | 1189686 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72035 | other | upstream | 2273268 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU71881 | other | upstream | 3162979 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU71802 | other | upstream | 3318727 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71670 | other | upstream | 3830932 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU72919 | other | downstream | 659580 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU73161 | other | downstream | 1113125 | 44386497 ~ 44387964 (+) | False | G58522 |
| TU73232 | other | downstream | 1293993 | 44567365 ~ 44570531 (+) | True | AMCG00009694 |
| TU73244 | other | downstream | 1311190 | 44584562 ~ 44599328 (+) | False | AMCG00009700 |
| TU73251 | other | downstream | 1359378 | 44632750 ~ 44651967 (+) | True | G58600 |
