RNA id: AMCG00009678


Basic Information

Item Value
RNA id AMCG00009678
length 267
RNA type mRNA
GC content 0.49
exon number 1
gene id AMCG00009678
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44073850 ~ 44074116 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGATCCTTTCCTCATCAACTCAACATCTGTTCTCAACACCACCTACAATACGGCAAAGGACAGAGATATCTGCAAGGACAAAACTGCTGGTTACATGTTCTTCATGATAGTGGAGTCCATCAGCACCATTGTGGGTATTCCAGCCAACCTGAGGACCCTGCAGGTGCTATGGGGGAGGGTGGCCGAGTCCTCCACTTCAGGTGTCTTCATTGGCCACCTTGCAGTCCTGGACACTCTGTTTTGCCTGTTCACTGTTTCAACCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73002 lncRNA downstream 96364 43977285 ~ 43977486 (-) True G58395
TU73001 lncRNA downstream 101220 43972264 ~ 43972630 (-) True G58394
TU72997 lncRNA downstream 126328 43938921 ~ 43947522 (-) True G58391
TU72982 lncRNA downstream 198111 43873781 ~ 43875739 (-) True G58377
TU72977 lncRNA downstream 202733 43870354 ~ 43871117 (-) True G58374
TU73065 lncRNA upstream 23160 44097276 ~ 44104710 (-) True G58452
TU73069 lncRNA upstream 35220 44109336 ~ 44109715 (-) True G58456
TU73070 lncRNA upstream 35853 44109969 ~ 44110283 (-) True G58457
TU73073 lncRNA upstream 41534 44115650 ~ 44121067 (-) True G58459
TU73143 lncRNA upstream 251041 44325157 ~ 44325573 (-) True G58511
AMCG00009677 mRNA downstream 9383 44051410 ~ 44064467 (-) True AMCG00009677
AMCG00009671 mRNA downstream 67047 43996712 ~ 44006803 (-) True AMCG00009671
AMCG00009672 mRNA downstream 79002 43991714 ~ 43994848 (-) False AMCG00009672
AMCG00009664 mRNA downstream 138092 43933227 ~ 43935758 (-) True AMCG00009664
AMCG00009666 mRNA downstream 143132 43924421 ~ 43930718 (-) True AMCG00009666
AMCG00009683 mRNA upstream 182299 44256415 ~ 44264122 (-) True AMCG00009683
AMCG00009690 mRNA upstream 210762 44284878 ~ 44293118 (-) True AMCG00009690
AMCG00009693 mRNA upstream 249869 44323985 ~ 44328354 (-) True AMCG00009693
AMCG00009692 mRNA upstream 264947 44339063 ~ 44342291 (-) True AMCG00009692
AMCG00009691 mRNA upstream 272354 44346470 ~ 44354753 (-) True AMCG00009691
TU73015 other downstream 78196 43989511 ~ 43995654 (-) True AMCG00009672
TU72928 other downstream 128553 43482421 ~ 43945297 (-) True G58333
TU72548 other downstream 1400143 42669127 ~ 42673707 (-) True G58025
TU71924 other downstream 3916379 40148725 ~ 40157471 (-) False AMCG00009521
TU71520 other downstream 5236286 38835316 ~ 38837564 (-) False AMCG00009472
TU73231 other upstream 434137 44508253 ~ 44512249 (-) False AMCG00009697
TU73235 other upstream 467778 44541894 ~ 44542809 (-) True G58584
TU73240 other upstream 491953 44566069 ~ 44566834 (-) True G58589
TU73318 other upstream 708802 44782918 ~ 44785134 (-) True G58653
TU73631 other upstream 1246727 45320843 ~ 45323950 (-) True AMCG00009748

Expression Profile