RNA id: AMCG00009697


Basic Information

Item Value
RNA id AMCG00009697
length 972
RNA type mRNA
GC content 0.62
exon number 5
gene id AMCG00009697
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44501787 ~ 44512249 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTGCCAGAGACCGGCGTCCTGATTCTGCTGTCCCTTGCCAATGGCACTCTTATCAGACTGGTGAACGGGTACAACAACTGCTCCGGCACGGTGGAGGTCTATTACAACGGACAGTGGGGGACGGTGTGCGACGACGACTGGGAGTTGGATGATGCACAAGTGGTGTGCCGGGAGCTGGGCTGTGGGGTCGCCCTGTCAGCTACGACCCATGCCCAGTTTGGACAGGGCTCGGGCAATATCGCTCTCGATGACGTGGCCTGTGTCGGGACAGAAACGTCTCTCCTGAACTGCCCCGCAAACCTGGGGAGCAACAACTGCGATCACTCGGAAGATGCCGGCGTCGTCTGCTCAGAGGGACCGAATGTTAGGCTGGTCAGTGGGAACAACAACTGCTCTGGCCGAGTGGAAGTCTCTTACAACGGTCAGTGGGGGACGGTGTGCGACGACGGCTGGGACACAAGGGACGCCCAGGTGGTCTGTAGAGAGCTGGGCTGCGGCGACGCTTTGTCCGCTCCCATGAAAGCCACGTTCGGGGGAGGGACCGGCCCAATTCAGTTAAATGACGTCCACTGCACCGGGAACGAGATGTCCCTACTGAACTGCCTGGCCAGCAGACGGACAGTTCGCAACTGCGGCCACAACGAAGACGCCAGCGCCATCTGTTCAGGTACAGGGCTGCCCGGCTACCCAGGCGACAGGTGCAATGGCAGAGTGGAGGTGTTCCACGCCGGGCTGTGGGGCACGGTCTGTGACCACGGCTGGGACCTGAACGCGGTGCGGGTGGTGTGCAGGGAGCTGGGCTGCGGCCGCGCTATCACACAACTCGGAGAGGCCACCTACGGGCAAGGCTCGGGCCGCATCTGGCTGGACGACGTGGCCTGCAGCGGCTCGGAGAGCACCCTGCTGGACTGCAGCCACAGAGCCTTCGGGGAACATAACTGCCAGCACAGTGAACGCCTGGTGCTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73196 lncRNA downstream 13433 44481052 ~ 44488354 (-) True G58548
TU73143 lncRNA downstream 176214 44325157 ~ 44325573 (-) True G58511
TU73073 lncRNA downstream 380720 44115650 ~ 44121067 (-) True G58459
TU73070 lncRNA downstream 391504 44109969 ~ 44110283 (-) True G58457
TU73069 lncRNA downstream 392072 44109336 ~ 44109715 (-) True G58456
TU73236 lncRNA upstream 30841 44542943 ~ 44543177 (-) True G58585
TU73256 lncRNA upstream 146314 44658416 ~ 44659098 (-) True G58605
TU73263 lncRNA upstream 149779 44661881 ~ 44662333 (-) True G58611
TU73264 lncRNA upstream 152636 44664738 ~ 44664945 (-) True G58612
TU73265 lncRNA upstream 153020 44665122 ~ 44665331 (-) True G58613
AMCG00009691 mRNA downstream 147034 44346470 ~ 44354753 (-) True AMCG00009691
AMCG00009692 mRNA downstream 159496 44339063 ~ 44342291 (-) True AMCG00009692
AMCG00009693 mRNA downstream 173433 44323985 ~ 44328354 (-) True AMCG00009693
AMCG00009690 mRNA downstream 208669 44284878 ~ 44293118 (-) True AMCG00009690
AMCG00009683 mRNA downstream 237665 44256415 ~ 44264122 (-) True AMCG00009683
AMCG00009704 mRNA upstream 141749 44653851 ~ 44654614 (-) True AMCG00009704
AMCG00009705 mRNA upstream 143942 44656044 ~ 44657724 (-) True AMCG00009705
AMCG00009710 mRNA upstream 170562 44682664 ~ 44693533 (-) True AMCG00009710
AMCG00009713 mRNA upstream 277028 44789130 ~ 44808487 (-) True AMCG00009713
AMCG00009718 mRNA upstream 409987 44922089 ~ 44927038 (-) True AMCG00009718
TU73015 other downstream 506133 43989511 ~ 43995654 (-) True AMCG00009672
TU72928 other downstream 556490 43482421 ~ 43945297 (-) True G58333
TU72548 other downstream 1828080 42669127 ~ 42673707 (-) True G58025
TU71924 other downstream 4344316 40148725 ~ 40157471 (-) False AMCG00009521
TU71520 other downstream 5664223 38835316 ~ 38837564 (-) False AMCG00009472
TU73235 other upstream 29792 44541894 ~ 44542809 (-) True G58584
TU73240 other upstream 53967 44566069 ~ 44566834 (-) True G58589
TU73318 other upstream 270816 44782918 ~ 44785134 (-) True G58653
TU73631 other upstream 808741 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other upstream 808741 45320843 ~ 45323322 (-) False AMCG00009748

Expression Profile