RNA id: AMCG00009710


Basic Information

Item Value
RNA id AMCG00009710
length 1529
RNA type mRNA
GC content 0.55
exon number 12
gene id AMCG00009710
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44682664 ~ 44693533 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGGCCGTGgtggtgtgggtgtgggtgtggaggggggggAAGATGCCTGTCATTAAAGACCGCCAGAAGAAGGCTGAAGACATCACAGCCGTGTACGAACTGAAGGAGAAGCTGGgagaGGGCTCGTTCTCGGAGGTGCGTCTGGCTCAGGACCGGCGCACTCAGAAGCTGGTGGCCGTCAAGTGCATCCAGAAGAGGGCGCTGAAGGGCATGGAGAGCATGCTGGAGAACGAGATCGCTGTGCTGCGCAGAATCAAACATGACAACATCGTGTCTCTGGAGGAGGTCTTTGAGACGCCCACCAAGCTGTACCTGGTGATGACCCTGTgcGTGCTGGATGCCGTGTGTTACCTGCACCGGCTGGGCATCGTGCACCGGGACCTCAAGCCAGAGAACCTGCTGTTCGACACCCCCTTCGAGGACTCCAAGATCGTCATCAGTGACTTCGGCCTGTCCAAGATGGAGGAGCAGGGGGCGCTGTCCACGGCCTGCGGGACCCCCGCGTACATCGCCCCGGAGCTCCTGGAACAGCAGACCTATGGGAAGGAAGTGGACCTGTGGGCTGTGGGGGTGATCGCCTATATTCTGCTGTGCGGTTACCCCCCCTTCTACGACGACAACGACACCGAGCTGTACAGGCAGATCGTGAAGGCCGAGTTCGAGTTCGACTCTCCGTACTGGGACGACATCTCGGACTCAGCCAAGGACTTCATCTCAAAGCTACTGCAGAGGGACCCAGAGAAGCGTTACACCGGGGAGCAGGCCCTGCAGCACCCCTGGATTTCGGGAGACACGGCCCTGCGGAGGAACATCCACGGCTCCGTCAGCGAGCAGATCCAGAAGAACTTCATCAAGGCGCAGTGGAAGAGGGCTTTCAATGCCACAGTTGTGATCCGCCACCTGACCAGGAAGACGCCGTGCGAGGGGGAGGGCACGGAGGACTGCGTGGCGGGGGGAGGACTGAAGCCGCGGGGGAGCAGAGCCATCCTGCACGATGCCTGTCACGTGTTGTGAATGAAAGGCGTCTATACTGGCCATAAAACCGGCACCAGGAGCCGAATGTGCTTGATTTGTGTccctcaaattattatttttattattatcattagtatcATTAATACATGAAAAGGTTTGTCTAGTTGTACTCTGCAGTGCTGCGTTGGTAAGATGTTGTCAAGAGCCTCATCATTAAACTGGTTCACTTTTCCCACGACACAAAGTTTTTGCTGCCTTATTGTCTTATTGCCGAACACGCAGGGCAGAGAAGGACGTGGGCCTGATCACATATgtcaacatatttattttgtatatgaagCCCAGTTGTGTGCCTGGTCCTACTGCGACAGTTATCCCAGTATCCTGCAAAGGCTGTCCGTACAGTTTCGCATTATTCAAGGCCGACTCAGCTGCTTCAGTTGTGGATCTCGACTACTCTGTGCGGCGAAAGCGTGCATTGGAAATCCCGTGGCTTTGCAGTGCTGTGTCTGCTTTATGTAAGGCAGGAATGTATACAGAACCGCTTGCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73265 lncRNA downstream 17333 44665122 ~ 44665331 (-) True G58613
TU73264 lncRNA downstream 17719 44664738 ~ 44664945 (-) True G58612
TU73263 lncRNA downstream 20331 44661881 ~ 44662333 (-) True G58611
TU73256 lncRNA downstream 23566 44658416 ~ 44659098 (-) True G58605
TU73236 lncRNA downstream 139487 44542943 ~ 44543177 (-) True G58585
TU73319 lncRNA upstream 92071 44785604 ~ 44786772 (-) True G58654
TU73386 lncRNA upstream 199259 44892792 ~ 44893083 (-) True G58699
TU73394 lncRNA upstream 223098 44916631 ~ 44916889 (-) True G58707
TU73413 lncRNA upstream 304499 44998032 ~ 45000234 (-) True G58724
TU73456 lncRNA upstream 396684 45090217 ~ 45119224 (-) True G58761
AMCG00009705 mRNA downstream 24940 44656044 ~ 44657724 (-) True AMCG00009705
AMCG00009704 mRNA downstream 28050 44653851 ~ 44654614 (-) True AMCG00009704
AMCG00009697 mRNA downstream 170562 44501787 ~ 44512102 (-) True AMCG00009697
AMCG00009691 mRNA downstream 327911 44346470 ~ 44354753 (-) True AMCG00009691
AMCG00009692 mRNA downstream 340373 44339063 ~ 44342291 (-) True AMCG00009692
AMCG00009713 mRNA upstream 95597 44789130 ~ 44808487 (-) True AMCG00009713
AMCG00009718 mRNA upstream 228556 44922089 ~ 44927038 (-) True AMCG00009718
AMCG00009717 mRNA upstream 276429 44969962 ~ 44976755 (-) True AMCG00009717
AMCG00009723 mRNA upstream 337384 45030917 ~ 45032715 (-) True AMCG00009723
AMCG00009725 mRNA upstream 349313 45042846 ~ 45046433 (-) True AMCG00009725
TU73240 other downstream 115830 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 139855 44541894 ~ 44542809 (-) True G58584
TU73231 other downstream 170415 44508253 ~ 44512249 (-) False AMCG00009697
TU73015 other downstream 687010 43989511 ~ 43995654 (-) True AMCG00009672
TU72928 other downstream 737367 43482421 ~ 43945297 (-) True G58333
TU73318 other upstream 89385 44782918 ~ 44785134 (-) True G58653
TU73631 other upstream 627310 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other upstream 627310 45320843 ~ 45323322 (-) False AMCG00009748

Expression Profile