RNA id: AMCG00009719



Basic Information


Item Value
RNA id AMCG00009719
length 1062
RNA type mRNA
GC content 0.64
exon number 4
gene id AMCG00009719
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44966879 ~ 44969079 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCGGAGGAGGAGAGGATGTCTAAAGACAGGGAACAGGCTGGAGAGGGGGAGGATGTGGTCAGCCCTGGCGCTggaatagaagaagaaaaagaggaggagaaagagaggatgCGTGGAGTGAGGGTGGACTTTGTCAGCCATGAAGCTGGAgtagaagaggaggaggaggaagagaggatgTGTGAAGGCTGGGAGGAgggtggagagggggaggacGTGGTCAGCCCTGACGCTGGAGGAGAagatggaggagaagaagatgatgataatgcagatgaagaggaggaggaggggactGCAGACGGAGGACAACAACATGTCGGTGACGATGGAGAGACGCAGGCAGCAGCCAAGGCTCCCCCGGGGAAGAAGACGGTCCCTGGGATCGTCTACCTGGGACACATCCCCCCCCGACTGAGGCCCAAGCACGTGCGCAACATGCTGGGCGTCCACGGAGAGATCGGCCGGATCTTCCTGCAGCCGGAGGGTGAGAgcgctggggtggggggtggcaaGCCTGGGGACCCTGAGACACTGAaCCACTCCGTGCgcaggaagaagaagaaggcgGGCTCGAACGCGCGCTCGTTCACCGAGGGCTGGGTGGAGTTCCGGGACAAGCGGGTGGCCAAGCGGGTGGCGCTCAGCCTGCACAGCGCGCCCATGGGCACCCGCAAGAGGAGCCGGTTCCACGACGACCTGTGTGTTTGGCTGGCACTGCTCTGGAGCTCACTGCGCCTGCGCACAGAGATCTCCCAGGCCAAGAgggagaccagcttctacctgGCCAACGTGGAGCGCAGCCGCGACCTGGACCGGCTCCGCaagaggagggagaaggagggccGCGGTGGGCCGGACAAGACCTGGGACTTCACCCAGCGGCGCACCGAGGACGAGATCCGGCAGCGGCGGCTCCAGGCCCCGGGCCCGGGCCGCTCCAAGAAGGAGCAGCGGAAGGCGCTGGAGAAGGCACAGCTCATCCAGGAGAAGGCCCAGTCCAACGTGTCCCTGCTGGCCAAGATCTTCAACAGCAGCAAGGCTGGCCAGGACAGCTGA

Function


GO: NA

KEGG:

id description
K14785 ESF2, ABT1; ESF2/ABP1 family protein

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73340 lncRNA upstream 43179 44922084 ~ 44923700 (+) True G58668
TU73326 lncRNA upstream 45242 44918043 ~ 44921637 (+) True G58660
TU73337 lncRNA upstream 73801 44892845 ~ 44893078 (+) True G58666
TU73281 lncRNA upstream 206821 44759277 ~ 44760058 (+) False AMCG00009706
TU73169 lncRNA upstream 483632 44413272 ~ 44483247 (+) True G58527
TU73472 lncRNA downstream 174096 45143175 ~ 45143472 (+) True G58776
TU73492 lncRNA downstream 225444 45194523 ~ 45198264 (+) True G58792
TU73541 lncRNA downstream 297860 45266939 ~ 45275033 (+) True G58825
TU73548 lncRNA downstream 307409 45276488 ~ 45277596 (+) True G58830
TU73535 lncRNA downstream 360705 45329784 ~ 45332856 (+) True G58822
AMCG00009716 mRNA upstream 4595 44950673 ~ 44962284 (+) True AMCG00009716
AMCG00009715 mRNA upstream 33065 44927867 ~ 44933814 (+) True AMCG00009715
AMCG00009714 mRNA upstream 50036 44901426 ~ 44916843 (+) True AMCG00009714
AMCG00009712 mRNA upstream 85154 44856527 ~ 44881725 (+) True AMCG00009712
AMCG00009709 mRNA upstream 185911 44768874 ~ 44780968 (+) True AMCG00009709
AMCG00009722 mRNA downstream 6581 44975660 ~ 44984837 (+) True AMCG00009722
AMCG00009720 mRNA downstream 20194 44989273 ~ 44998008 (+) True AMCG00009720
AMCG00009726 mRNA downstream 32059 45001138 ~ 45003572 (+) True AMCG00009726
AMCG00009721 mRNA downstream 36090 45005169 ~ 45031780 (+) True AMCG00009721
AMCG00009730 mRNA downstream 120124 45089203 ~ 45093238 (+) True AMCG00009730
TU73251 other upstream 314912 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 367551 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 396348 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 578915 44386497 ~ 44387964 (+) False G58522
TU72919 other upstream 1031117 43932952 ~ 43935762 (+) True G58324
TU73437 other downstream 86986 45056065 ~ 45057874 (+) True G58747
TU73602 other downstream 539115 45508194 ~ 45509104 (+) False AMCG00009761
TU73611 other downstream 590898 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 785507 45754586 ~ 45755115 (+) True G59084

Expression Profile