RNA id: AMCG00009720


Basic Information

Item Value
RNA id AMCG00009720
length 1343
RNA type mRNA
GC content 0.58
exon number 15
gene id AMCG00009720
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44989273 ~ 44998008 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGCTCAATGGGGAGGACGACGCTCTGGGCCCCTACAGGACCCTGCAGGACCGGAGCCGCATCCAGCTGCTAGGCCATGTTTGTGAGGGGCGGTGTGAGGGGCAGTGTGCGGACAGGAAGCTCCCTCAGCATGCACTCCCTGCTGCAGTCCTACAGCTCCGCCCTGCGCCGGCCGCACCACCTGGGTCGCAGCCTCAGCTCCTACCTGAACCGCAACACACGCCTGGCCCTGTCCGGGTACGACTGAGAAACAACCCGGCACGCAAGATCTCCACTGAGGACATCAATAAGCGTCTGTCTCTGCCGGCTGATATCAGGCTGCCCGATGGCTACCTGGAGAAGTTCTCCCTCAACAGTCCTCCATTCGACAAGCCGCTGAGCCGCCGGCTACGGAGAGTCTCCCTGtctGAGATTGGCTTTGGGAAGCTGGAGACCTATGTCAAGCTGGACAAACTGGGAGAGGGGACCTACGCCACGGTGTACAAGGGCCGCAGCAAACTGACAGACAACCTGGTGGCCCTGAAGGAGATCAGGCTGGAGCACGAGGAGGGTGCGCCCTGCACCGCCATcagggaggTGTCCCTCCTGAAGGACCTGAAGCACGCCAACATCGTCACTCTGCACGACATCATCCACACCCAGAAATCCCTGACACTGGTCTTCGAGTACCTGgacaaGGATCTGAAGCAGTACTTGGATGACTGTGGGAACTGCATCGCCATGCACAATGTGAAGGTGGTGACTCTATGGTACCGTCCCCCAGACATCCTGCTGGGCTCCACAGACTACTCCACCCAGATAGACATGTGGGGTGTGGGCTGTATCTTCTATGAGATGTCCACGGGCCGCCCTCTGTTCCCAGGGTCCACTGTGGAGGAGGAGCTGCACTTCATCTTCAAACTGCTCGgctGGACAATGATGGTGTGCAGCTGCTCTCCAAACTCCTACAGGAAGCGCATCTCGGCGGACGAGGCCATGAGGCAGCCGTACTTCCACAGCCTGGGGGCGAGGGTGGTCCGGCTCCCCgacactacTTCTATATTTGCACTAAAGGAGATCCAGCTGGAGAAGGAAGCGGCGGTGCGGACGAGCTCTCTGCCAGAGTCAGCCCTGAAAGTGTGTGTGGAGGACGCGGAGTTCTGACCCAGTCAGTAGCAAATCAAGAAGACAGAGCCTGCTTCTCTGAGAGTGAGAGACGTGCCCAGAAGGGAAAccggagagggagggagggaggcagggggcGTGGCGTTGTATTATCAATGGGACTCATATTTAACTTgttcagtttttacattttttggggggggggtttgtttCCCAGAGAGGGGCCTTTCGTCTTT

Function

GO:

id name namespace
GO:0016301 kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73340 lncRNA upstream 65573 44922084 ~ 44923700 (+) True G58668
TU73326 lncRNA upstream 67636 44918043 ~ 44921637 (+) True G58660
TU73337 lncRNA upstream 96195 44892845 ~ 44893078 (+) True G58666
TU73281 lncRNA upstream 229215 44759277 ~ 44760058 (+) False AMCG00009706
TU73169 lncRNA upstream 506026 44413272 ~ 44483247 (+) True G58527
TU73472 lncRNA downstream 145167 45143175 ~ 45143472 (+) True G58776
TU73492 lncRNA downstream 196515 45194523 ~ 45198264 (+) True G58792
TU73541 lncRNA downstream 268931 45266939 ~ 45275033 (+) True G58825
TU73548 lncRNA downstream 278480 45276488 ~ 45277596 (+) True G58830
TU73535 lncRNA downstream 331776 45329784 ~ 45332856 (+) True G58822
AMCG00009722 mRNA upstream 4436 44975660 ~ 44984837 (+) True AMCG00009722
AMCG00009719 mRNA upstream 20194 44966879 ~ 44969079 (+) True AMCG00009719
AMCG00009716 mRNA upstream 26989 44950673 ~ 44962284 (+) True AMCG00009716
AMCG00009715 mRNA upstream 55459 44927867 ~ 44933814 (+) True AMCG00009715
AMCG00009714 mRNA upstream 72430 44901426 ~ 44916843 (+) True AMCG00009714
AMCG00009726 mRNA downstream 3130 45001138 ~ 45003572 (+) True AMCG00009726
AMCG00009721 mRNA downstream 7161 45005169 ~ 45031780 (+) True AMCG00009721
AMCG00009730 mRNA downstream 91195 45089203 ~ 45093238 (+) True AMCG00009730
AMCG00009728 mRNA downstream 107528 45105536 ~ 45111832 (+) True AMCG00009728
AMCG00009727 mRNA downstream 117655 45115663 ~ 45119186 (+) True AMCG00009727
TU73251 other upstream 337306 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 389945 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 418742 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 601309 44386497 ~ 44387964 (+) False G58522
TU72919 other upstream 1053511 43932952 ~ 43935762 (+) True G58324
TU73437 other downstream 58057 45056065 ~ 45057874 (+) True G58747
TU73602 other downstream 510186 45508194 ~ 45509104 (+) False AMCG00009761
TU73611 other downstream 561969 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 756578 45754586 ~ 45755115 (+) True G59084

Expression Profile