RNA id: AMCG00009725


Basic Information

Item Value
RNA id AMCG00009725
length 531
RNA type mRNA
GC content 0.57
exon number 5
gene id AMCG00009725
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45042846 ~ 45046433 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGAGATGTTAAAGTCCATCAGCCAGTGTCTCCAGTGAGGAACTTTTTTGCTGGGGGTGTCGGAGGAGCGTGCTTACTGCTGGCCGGACACCCGCTGGACACCATTAAGGTTCGACTACAGACTCAACCTACAGTTGCCTGTGGACAGCATGTTGTCTACACAGGGACCATGGACTGTCTGAGGAGTACAGTGGCCCAAGAGTTTCTTCGGGTTTGGTCTGGGGAAGCGACTGCAGCAGCGAGACTCAGACAGCCCCCTCACAGGGCTGATGACCTTTCCACCGCTTTGGATTTCAGCGTGGATGAGCTGAGCATTCCCAGAATCCTCTTTGCTGGGGGCATGGCAGGCATCTGTAACTGGGCCGTGGCAATACCTGCTGATGTCCTCAAGTCCATCACCCAGACAGCCCCGGAAGGGAAGTACTCTGGATTGCGGGACGTGCTCCGTGAGCTGGTGAGAGATGAAGGCCTGCGCTCCCTGTACAAGGGCTTCAGTGCCGTGATGCTGCGAGCCTTTCCTGCCAACGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73413 lncRNA downstream 42612 44998032 ~ 45000234 (-) True G58724
TU73394 lncRNA downstream 125957 44916631 ~ 44916889 (-) True G58707
TU73386 lncRNA downstream 149763 44892792 ~ 44893083 (-) True G58699
TU73319 lncRNA downstream 256074 44785604 ~ 44786772 (-) True G58654
TU73265 lncRNA downstream 377515 44665122 ~ 44665331 (-) True G58613
TU73456 lncRNA upstream 43784 45090217 ~ 45119224 (-) True G58761
TU73509 lncRNA upstream 122508 45168941 ~ 45230457 (-) False AMCG00009739
TU73521 lncRNA upstream 137928 45184361 ~ 45250020 (-) True G58808
TU73514 lncRNA upstream 173196 45219629 ~ 45241933 (-) True G58807
TU73621 lncRNA upstream 205951 45252384 ~ 45277597 (-) False AMCG00009742
AMCG00009723 mRNA downstream 10131 45030917 ~ 45032715 (-) True AMCG00009723
AMCG00009717 mRNA downstream 66091 44969962 ~ 44976755 (-) True AMCG00009717
AMCG00009718 mRNA downstream 115808 44922089 ~ 44927038 (-) True AMCG00009718
AMCG00009713 mRNA downstream 234359 44789130 ~ 44808487 (-) True AMCG00009713
AMCG00009710 mRNA downstream 349313 44682664 ~ 44693533 (-) True AMCG00009710
AMCG00009724 mRNA upstream 11241 45057674 ~ 45087487 (-) True AMCG00009724
AMCG00009732 mRNA upstream 67000 45113433 ~ 45114885 (-) True AMCG00009732
AMCG00009733 mRNA upstream 73878 45120311 ~ 45124004 (-) True AMCG00009733
AMCG00009739 mRNA upstream 177656 45224089 ~ 45230405 (-) True AMCG00009739
AMCG00009740 mRNA upstream 199279 45245712 ~ 45246944 (-) True AMCG00009740
TU73318 other downstream 257712 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 476012 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 500037 44541894 ~ 44542809 (-) True G58584
TU73231 other downstream 530597 44508253 ~ 44512249 (-) False AMCG00009697
TU73015 other downstream 1047192 43989511 ~ 43995654 (-) True AMCG00009672
TU73631 other upstream 274410 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other upstream 274410 45320843 ~ 45323322 (-) False AMCG00009748

Expression Profile