RNA id: AMCG00009734


Basic Information

Item Value
RNA id AMCG00009734
length 1861
RNA type mRNA
GC content 0.60
exon number 3
gene id AMCG00009734
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45236167 ~ 45241904 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ccccctctctctctttctctctctcatgcttagaccacaccccctcctcctcccccctctctcctccttgtcatccctctctcctctgcgCCTCCCTCAGTCTCAGAGCTGGACGCACACAGACCCCAGGGCAGCCTCATCTCCTCTCAGGATGTCGGGCCCTCTGAACAAACCCTTCTGGCTCCCCCTCGCCTGCCTTGTCCTCCTCACCGCACCGCCGCTGCTGCCCGCCAAGccgGTGGCCAGTGGTCTTCCTCGTGGTGGGTGGAACCCAGTGGAGGAGGTGGGCGGGGCCATGCGTCTGCGCAGGGAGCTCCGTGATTCACTGCCGTATGAGGCTCAGATGGTGATGTCATACCCCGGCCAATCAGCAGCCGCCGCACTGGGCGAGGGGCggggcaacaacaacaacaacaacaacaatgagcTTTTCCTCCAGACGGACGGCtggagggggcggggcctgGGCCAGGCCCTGCAGCAATTGGCCGAGGACGACAAGAGGCGGGACCAGGAGGCCGCTTACCTGGCCGGCTTGCTCCGCCTCCTCAGCGAGGGCTATGACTCCGCCCCACCGTccaggctgggggggggggaggaagaCGGCGAGGAGGAGGGCGGGGACTTCCAGGGGCCCTACCCCCCAGACTACGACGACACAGAGCCGGGCCTCAGCATGGCCAAGCCCCAGGCCTGGAGCGGCCTGCTGGACCCCCAGCTCACACAGACGCTGCTCAACCGGTACAGACAGGAGCGCCGGCTGCAAGGGCCCCCAccggccccccagccccccagcagACAGCAGGGAGGAGctgaggagggagaggaggaggtgctgagGTACCTCGTGGGGAGGGTCCTGTCTAGCCTGGCCTCAGAGACGCCGCAGCAGCAGCCGCCCCACCGCCTGGCCCGGAGAGACCTGGGGGTGCTGGGGGGTGagcgctcctcctcctcctcctcctcttcctcccctctGAAACGCTCCCGCCGCTCCCTGGACGACAAAGCCCCCCCAGCGACCGACGCCGAGCCCTCGCTGCTCAGAGTGAAGcggctggaggaggaggaggagacggcCGGGAGGGGCGCGGCGCTGCAGCGGATGAAGAGGATTGACGGGGAGCGGCCGCAGCGGCCACAGCAGCAGAGCGGGGGGGGGCGGCAGGCACGGAAGAGGCGCGCCCTTACCTTTGACCCCGACCTCCTGGCCCAACGCATCTTACAGTACCTGCCTgactgagtgagagagagagagagggagagagagagagagagagagagagagagggagggagggagagaggagagtacagggagagggagaggacagATGTGAAGAAGTGAATGCAAGAACTGGACATGCACATCAACAACACAGGAGTAATTAAAACTGGAAGCTATACACAACAAGCAGCAAGATGGCCCTCTATAGAGACTGATAacataacacacacaatacaacacagtacagcacagaagTGAGGGAGTTAGACAGAGAAACCAAATACAGCACACAGTGTAGCACAGACTCCAGGTAACGACACGCAGCCCGAGAGGAACACgtcagacacacgcacacacacacacagacaggcactcCACTCCTGCCTCCTCcgctctcttctctcctctgttTCGCTCTATCCTGTGACTTTGTGgattcaataaataaagaaaactaaaaaaaaaaatcataaaaaaaaataattaaagtgatATGAAATGATTGTGGCTTTTCTGAGTCTCGTGCACAATTCTCTATCaagctgtacaaaataaataaaccaataaatgaacgaataaatgatttaaaagtgttttttgctCGCCAGCTCTTGTTCACCTGATTACAGAGAGA

Function

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73492 lncRNA upstream 37903 45194523 ~ 45198264 (+) True G58792
TU73472 lncRNA upstream 92695 45143175 ~ 45143472 (+) True G58776
TU73340 lncRNA upstream 312467 44922084 ~ 44923700 (+) True G58668
TU73326 lncRNA upstream 314530 44918043 ~ 44921637 (+) True G58660
TU73337 lncRNA upstream 343089 44892845 ~ 44893078 (+) True G58666
TU73541 lncRNA downstream 25035 45266939 ~ 45275033 (+) True G58825
TU73548 lncRNA downstream 34584 45276488 ~ 45277596 (+) True G58830
TU73535 lncRNA downstream 87880 45329784 ~ 45332856 (+) True G58822
TU73534 lncRNA downstream 97701 45339605 ~ 45398453 (+) True G58821
TU73604 lncRNA downstream 270732 45512636 ~ 45513047 (+) True G58876
AMCG00009735 mRNA upstream 15480 45212567 ~ 45220687 (+) True AMCG00009735
AMCG00009737 mRNA upstream 48055 45187220 ~ 45188112 (+) True AMCG00009737
AMCG00009738 mRNA upstream 51435 45175166 ~ 45184732 (+) True AMCG00009738
AMCG00009729 mRNA upstream 66884 45139540 ~ 45169283 (+) True AMCG00009729
AMCG00009731 mRNA upstream 99309 45135424 ~ 45136858 (+) True AMCG00009731
AMCG00009736 mRNA downstream 10031 45251935 ~ 45254181 (+) True AMCG00009736
AMCG00009749 mRNA downstream 67653 45309557 ~ 45312392 (+) True AMCG00009749
AMCG00009743 mRNA downstream 134534 45376438 ~ 45389713 (+) True AMCG00009743
AMCG00009753 mRNA downstream 148848 45390752 ~ 45396023 (+) True AMCG00009753
AMCG00009751 mRNA downstream 180623 45422527 ~ 45435865 (+) True AMCG00009751
TU73437 other upstream 178293 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 584200 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 636839 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 665636 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 848203 44386497 ~ 44387964 (+) False G58522
TU73602 other downstream 266290 45508194 ~ 45509104 (+) False AMCG00009761
TU73611 other downstream 318073 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 512682 45754586 ~ 45755115 (+) True G59084

Expression Profile