RNA id: AMCG00009738



Basic Information


Item Value
RNA id AMCG00009738
length 597
RNA type mRNA
GC content 0.59
exon number 4
gene id AMCG00009738
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45175166 ~ 45184732 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGCGGTGTTACTATCCCCCCGTTTGGCCCGAAAGTGTCTCAGGCGCCGGGGCCAGTTGGCAGCCTGGCTGTGGCCCGGAGGCAGATGGCCGTCTGTGTGAGCTGGCAGCCTGTGGGCTCGTCTATTACTGTGGCAAACAACCCTGAACTGCAGCCCCCGGCACTGCGCTCCAGCCTGGCAATACGGGGCTGTTCGGATAAACCGCCTCCCTCCCCCCACTCTGCTGATCTCCTTATCTtcgagagagacagagcggcGAAGATGGATATTGTGAATCAGTTGGTTGCTACTGGGCAGTTTAAAGTCGCCAAAGAGCCTCTGGGGTTCATCAAGATCCTGCAATGGTCAGGTTCAGCATCTCCGTGTCCAGGGGGTATAGTGATAGATGTCATTGCGTCACGGGGGCTGGAGTGCAGCTGTGTATTCATGCCAGGGCGCCGTGTCTCCGTGCCGGAGTGGCAGCCCCACAGAAAGCTGTCCCACAGCAAGCTGTCACACAGGAAGCTGTCACAGGGCCCAGCCAGCCGCCTCGCCTCACAGTCATCTGTGTGTCGAGGTCTCTGGCCAGTGAGAAATGTAGAGCTGTGCTCAGTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73472 lncRNA upstream 31694 45143175 ~ 45143472 (+) True G58776
TU73340 lncRNA upstream 251466 44922084 ~ 44923700 (+) True G58668
TU73326 lncRNA upstream 253529 44918043 ~ 44921637 (+) True G58660
TU73337 lncRNA upstream 282088 44892845 ~ 44893078 (+) True G58666
TU73281 lncRNA upstream 415108 44759277 ~ 44760058 (+) False AMCG00009706
TU73492 lncRNA downstream 9791 45194523 ~ 45198264 (+) True G58792
TU73541 lncRNA downstream 82207 45266939 ~ 45275033 (+) True G58825
TU73548 lncRNA downstream 91756 45276488 ~ 45277596 (+) True G58830
TU73535 lncRNA downstream 145052 45329784 ~ 45332856 (+) True G58822
TU73534 lncRNA downstream 154873 45339605 ~ 45398453 (+) True G58821
AMCG00009729 mRNA upstream 5883 45139540 ~ 45169283 (+) True AMCG00009729
AMCG00009731 mRNA upstream 38308 45135424 ~ 45136858 (+) True AMCG00009731
AMCG00009727 mRNA upstream 55980 45115663 ~ 45119186 (+) True AMCG00009727
AMCG00009728 mRNA upstream 63334 45105536 ~ 45111832 (+) True AMCG00009728
AMCG00009730 mRNA upstream 81928 45089203 ~ 45093238 (+) True AMCG00009730
AMCG00009737 mRNA downstream 2488 45187220 ~ 45188112 (+) True AMCG00009737
AMCG00009735 mRNA downstream 27835 45212567 ~ 45220687 (+) True AMCG00009735
AMCG00009734 mRNA downstream 51435 45236167 ~ 45241904 (+) True AMCG00009734
AMCG00009736 mRNA downstream 67203 45251935 ~ 45254181 (+) True AMCG00009736
AMCG00009749 mRNA downstream 124825 45309557 ~ 45312392 (+) True AMCG00009749
TU73437 other upstream 117292 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 523199 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 575838 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 604635 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 787202 44386497 ~ 44387964 (+) False G58522
TU73602 other downstream 323462 45508194 ~ 45509104 (+) False AMCG00009761
TU73611 other downstream 375245 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 569854 45754586 ~ 45755115 (+) True G59084

Expression Profile