RNA id: AMCG00009740


Basic Information

Item Value
RNA id AMCG00009740
length 675
RNA type mRNA
GC content 0.71
exon number 3
gene id AMCG00009740
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45245712 ~ 45246944 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCAGTGTGGCGCGGGCATGGCGGTTCGGCCGCTGGCGGAGGTGTCCAGCCTGTACCAGACGGAGTTTGTGCGCAGCGCCCGGGCGGTGGGCGCGCTGTGGGCCGGCTTCTCGCTGTGCTTCTCCGTCATCGCCGCTGTGGCGCTGGTCCAGCCCTCCTGGGTCGGCACCGGGGAGCTGCGGTACCGGCCCGGCCAGGGGGAGGCGCCGCTGGCCGGCTCACTGGGCCTGTTTGAGGTGTGCCTCGACACGGACGCCCTGGTGCCGGAGTGCCGTGGCTCTCTGCGCACCCTCACGCCCCTGAGCCCCTTCCAGTCGCCCGCCGTGCTGGTGTGCATGGCGCTGGCGCTGGTGTGGGCCAGCGTGGGCTGCCTGGCGCTGTTCCGCTTCTGCAATGCCGCCACCGTGTACAAGGTCTGCGCCTGGCTGCAGCTCACGGCCGGGTTCTGCCTGGCGCTGGGCTGCGTGCTCTTTGCCGACTCCTGGGACTGTGCCGAGATGCGCGCTCTGTGCGGGCCGGCCGTGTCCAGCTTCTCGCCGGGCCGCTGCTCTGTGGGCTGGGCCTACGTGCTGGCCATCCTGGGCGTGCTGGATGCCGCCATCCTGTCCACCCTGGCCTTCCCTCCAGCTTTCTCCTGGCCTCCTAGAGACGCAGCCTCACCGGCCTGGCTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73514 lncRNA downstream 3779 45219629 ~ 45241933 (-) True G58807
TU73509 lncRNA downstream 15255 45168941 ~ 45230457 (-) False AMCG00009739
TU73456 lncRNA downstream 126488 45090217 ~ 45119224 (-) True G58761
TU73413 lncRNA downstream 245478 44998032 ~ 45000234 (-) True G58724
TU73394 lncRNA downstream 328823 44916631 ~ 44916889 (-) True G58707
TU73621 lncRNA upstream 5440 45252384 ~ 45277597 (-) False AMCG00009742
TU73634 lncRNA upstream 85271 45332215 ~ 45336884 (-) True G58901
TU73635 lncRNA upstream 90211 45337155 ~ 45339418 (-) True G58902
TU73636 lncRNA upstream 92556 45339500 ~ 45345259 (-) True G58903
TU73637 lncRNA upstream 125814 45372758 ~ 45373072 (-) True G58904
AMCG00009739 mRNA downstream 15307 45224089 ~ 45230405 (-) True AMCG00009739
AMCG00009733 mRNA downstream 121708 45120311 ~ 45124004 (-) True AMCG00009733
AMCG00009732 mRNA downstream 130827 45113433 ~ 45114885 (-) True AMCG00009732
AMCG00009724 mRNA downstream 158225 45057674 ~ 45087487 (-) True AMCG00009724
AMCG00009725 mRNA downstream 199279 45042846 ~ 45046433 (-) True AMCG00009725
AMCG00009742 mRNA upstream 4693 45251637 ~ 45261295 (-) True AMCG00009742
AMCG00009741 mRNA upstream 20459 45267403 ~ 45269612 (-) True AMCG00009741
AMCG00009747 mRNA upstream 34258 45281202 ~ 45283020 (-) True AMCG00009747
AMCG00009746 mRNA upstream 40074 45287018 ~ 45305373 (-) True AMCG00009746
AMCG00009744 mRNA upstream 68331 45315275 ~ 45318328 (-) True AMCG00009744
TU73318 other downstream 460578 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 678878 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 702903 44541894 ~ 44542809 (-) True G58584
TU73231 other downstream 733463 44508253 ~ 44512249 (-) False AMCG00009697
TU73015 other downstream 1250058 43989511 ~ 43995654 (-) True AMCG00009672
TU73631 other upstream 73899 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other upstream 73899 45320843 ~ 45323322 (-) False AMCG00009748

Expression Profile