RNA id: AMCG00009755


Basic Information

Item Value
RNA id AMCG00009755
length 846
RNA type mRNA
GC content 0.67
exon number 4
gene id AMCG00009755
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45458743 ~ 45465377 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTCACGGGGAGACGGGCATCATGGACATGGGACGGGGGACCGCGGAGACAGGCCAGGGCACCGCCCCCCCCACTGCAGATGCGCCACACGCACAGGACATGGGACATGGCGCTCACGCACACGCTACAGGCAAGACTGCCAGGTCGACCCTAcagctctCAGAGGCAGACAGCGCATGTGCGTTGGACAATAAGCGATCCTTGACTGACGACCCCTCGGCCAATGAGAGTGCCCAGCTGCTCCCTCACCGTGAGACGCAGCCTGCCCCAGTAGGAGTGCCAGGCCCCGCCCTACCTCAGCCACAGACTCCGCCCAATGGGTGTGTCCCAGCAGAAACACCGCCTCCCCCGCTCAATGGACACCCCCACAATGGGAGTGTATCCAACGGGACCACACCCATCtgctcccctccccccagccGGGCCCCACACCCCGCGCAGTGCAATTGCCACGCCCACCCGGGCAGACGGCCGCGCCTCAGCTCCGCCCCAAACCTGTGTGCGTCGCTGCTGCTGGCCTGCCTGTGGTGCCGGCTGGCAGATTGCATCTTCCTGTCAGCGGAGGGCTGTGGCCTGTGCACCTCCGCCCTCTGCTCCTCACTCTGCTCTTCCTTCTCCTCGCTGTCCCCCCTCtgttgctgctgcagctgcaccGGCGGCTCCCCCTCCCTGCTGGAGGAAGGCATGCTGGAGGTGGGCCAGtgctgctggggggggggtggctgcCTGGACACGCACTGCTGCGGGGGGCTGCACTGGGACTGCTCCCTGTGGGACGCCTGCCTGCAGACCACCGAGTGCCTGGAGCTCGGCATGGAGGTGTCCCAGCTGCTGTTCCACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73637 lncRNA downstream 85671 45372758 ~ 45373072 (-) True G58904
TU73636 lncRNA downstream 113484 45339500 ~ 45345259 (-) True G58903
TU73635 lncRNA downstream 119325 45337155 ~ 45339418 (-) True G58902
TU73634 lncRNA downstream 121859 45332215 ~ 45336884 (-) True G58901
TU73621 lncRNA downstream 181146 45252384 ~ 45277597 (-) False AMCG00009742
TU73679 lncRNA upstream 10823 45473535 ~ 45554714 (-) True G58940
TU73724 lncRNA upstream 119794 45582506 ~ 45583007 (-) True G58979
TU73723 lncRNA upstream 122091 45584803 ~ 45585371 (-) True G58978
TU73729 lncRNA upstream 129035 45591747 ~ 45629373 (-) True G58982
TU73730 lncRNA upstream 139509 45602221 ~ 45629373 (-) False G58982
AMCG00009756 mRNA downstream 373 45457812 ~ 45458370 (-) True AMCG00009756
AMCG00009754 mRNA downstream 56328 45397189 ~ 45402415 (-) True AMCG00009754
AMCG00009745 mRNA downstream 107563 45345981 ~ 45351180 (-) True AMCG00009745
AMCG00009748 mRNA downstream 132688 45320757 ~ 45326055 (-) False AMCG00009748
AMCG00009744 mRNA downstream 140415 45315275 ~ 45318328 (-) True AMCG00009744
AMCG00009766 mRNA upstream 175265 45637977 ~ 45642744 (-) False AMCG00009766
AMCG00009767 mRNA upstream 215529 45678241 ~ 45678855 (-) True AMCG00009767
AMCG00009771 mRNA upstream 220848 45683560 ~ 45695262 (-) True AMCG00009771
AMCG00009770 mRNA upstream 239221 45701933 ~ 45704510 (-) True AMCG00009770
AMCG00009768 mRNA upstream 243155 45705867 ~ 45738830 (-) True AMCG00009768
TU73631 other downstream 134793 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other downstream 135421 45320843 ~ 45323322 (-) False AMCG00009748
TU73318 other downstream 673609 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 891909 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 915934 44541894 ~ 44542809 (-) True G58584

Expression Profile