RNA id: TU73715



Basic Information


Item Value
RNA id TU73715
length 948
lncRNA type sense_over
GC content 0.57
exon number 3
gene id AMCG00009758
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45576539 ~ 45584727 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gggagagagagggagtgtctgtcagaggggaggagagggatGGGGCAGTGAGGAGAGAATGGGGGTGAGGAACGGGTGCCTGTGTGGCACTCAGAGCAGTGGCTGTGCTGTGGCTACAGGCTGGGATGCAGAGAGCGACTGGAAGGACGTGCTGTCGGGGGGAGAGAAGCAGCGCATGGGAATGGCCAGGATGTTCTACCACAGGTAAGaatcagtgtctgtctgtgtttgcaaGAATCAGTCTGACAGCGCAGTGTTCTAATAGTGCAGCGCAGTGTTCTATAGCCCAGTGTTCTATAGCCCAGTGTTCTATAGCCCAGTGTTCTATAGCCCAGTGTTCTATAGCCCAGTGTTCTATAGCCCAGTGTTCCAATACTGCAGCGCAGTGTTCTATACACCAGTGTTCTAGTAGTGCAGCGCAGTGTTCTATAGCCGTGTTCTAATAGTGCAGCGCAGTGTTCTATAGCCCAGTGTTCCAATAGTGCAGCGCAGTGTTCTATACACCAGTGTTCCAATAGTGCAGCGCAGTGTTCTATTCACCAGTGTTCCAGTAGTGCAGTatattgcagtgcagtgcagtgtttgaCAGTGAagtgtgctgtgctgctgctgttgcaggCCCAAGTACGCCCTGCTGGACGAGTGCACCAGTGCTGTGAGCATCGATGTAGAGGGCAAGATCTTTCAGGCCGCCAAGGATGCCGGCATTGCCCTGCTATCCATCACACACCGGCCATCGCtgtggAAGTTCCACTCCCACCTGCTGCAGTTCGACGGGGAGGGCGGGTGGCGCTTTGAGCCCCTGGACGCGTCCACACGGCTTTCCCTGCAGGACGAGAAGCTGCGCCTGGAGGCCCAGCTGACGGGGATCCCCCGGGTGCAGCACAGGCTGGCCGAGCTGCGCAGGATCCTGGGGGAGGACAGCGGCCACGGGGAGGCCACAGGGAg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73708 lncRNA upstream 6555 45573270 ~ 45575964 (+) True AMCG00009760
TU73604 lncRNA upstream 69472 45512636 ~ 45513047 (+) True G58876
TU73534 lncRNA upstream 184066 45339605 ~ 45398453 (+) True G58821
TU73535 lncRNA upstream 249663 45329784 ~ 45332856 (+) True G58822
TU73548 lncRNA upstream 304923 45276488 ~ 45277596 (+) True G58830
TU73710 lncRNA downstream 89 45584758 ~ 45585330 (+) True G58971
TU73711 lncRNA downstream 155 45584824 ~ 45585330 (+) False G58971
TU73754 lncRNA downstream 54966 45639635 ~ 45640037 (+) True G59006
TU73778 lncRNA downstream 89260 45673929 ~ 45674702 (+) True G59026
TU73780 lncRNA downstream 91034 45675703 ~ 45683641 (+) True G59028
AMCG00009760 mRNA upstream 8443 45573270 ~ 45574076 (+) False AMCG00009760
AMCG00009759 mRNA upstream 10264 45560291 ~ 45572255 (+) False AMCG00009759
AMCG00009757 mRNA upstream 51083 45521353 ~ 45531436 (+) True AMCG00009757
AMCG00009761 mRNA upstream 71482 45507767 ~ 45511037 (+) True AMCG00009761
AMCG00009750 mRNA upstream 105522 45466659 ~ 45476997 (+) True AMCG00009750
AMCG00009763 mRNA downstream 13938 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009764 mRNA downstream 58569 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009765 mRNA downstream 65415 45650084 ~ 45656237 (+) True AMCG00009765
AMCG00009762 mRNA downstream 72092 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009772 mRNA downstream 290964 45875633 ~ 45879015 (+) True AMCG00009772
TU73611 other upstream 10884 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 73415 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 524645 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 930552 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 983191 44584562 ~ 44599328 (+) False AMCG00009700
TU73851 other downstream 169917 45754586 ~ 45755115 (+) True G59084

Expression Profile