RNA id: TU73602



Basic Information


Item Value
RNA id TU73602
length 536
RNA type TUCP
GC content 0.65
exon number 4
gene id AMCG00009761
representative False

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45507767 ~ 45511037 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GGGAGCTGGAGCTGCTGCCCACGGAGCACCGGGCAGACGGGCGCGGGGAGCCGGAGCTGGACAGCGTGGctggagagagcgagaggagcGGCAGTCTGGCCGGCAGCGAGAGGGACTTCAccacaaacaagaaacaacgCCGAGAGAGgtCGTTCACAGGCCAGCGGAGGGGGCGCGGCATGCGTAATGATGGCTGGCAGGACTGGCCCTTGCTGGGACCCGGCTGGAGGCGCAAGGAGGTGTTCCGCAGGTCGGGCTTCACCGTGGGCAAGACCGACACCTACTACATGAGTCCCGACGGCAGCCGCCTGCGCAGTAAGATCGAGATGGCCAAGCACATGGGCGCGGCAATGGACATCTCCAAGTTCGACTTCAAGTCGGGGGTGTTCCTGGAGCGTGGGAGCGTCCTGAAACACAAGCGCCGGAAGAAGCAGACAGACCAGTCCTGGTCTCCAGAGAGCAGCTACTCCTCCGAGAAGATCGGCACCCCTGAGCGCAGCGGCACCCCCGACCCACATGTGCCCACCCCCGAGAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73534 lncRNA upstream 109741 45339605 ~ 45398453 (+) True G58821
TU73535 lncRNA upstream 175338 45329784 ~ 45332856 (+) True G58822
TU73548 lncRNA upstream 230598 45276488 ~ 45277596 (+) True G58830
TU73541 lncRNA upstream 233161 45266939 ~ 45275033 (+) True G58825
TU73492 lncRNA upstream 309930 45194523 ~ 45198264 (+) True G58792
TU73604 lncRNA downstream 3532 45512636 ~ 45513047 (+) True G58876
TU73708 lncRNA downstream 64166 45573270 ~ 45575964 (+) True AMCG00009760
TU73715 lncRNA downstream 73415 45582519 ~ 45584669 (+) False AMCG00009758
TU73710 lncRNA downstream 75654 45584758 ~ 45585330 (+) True G58971
TU73711 lncRNA downstream 75720 45584824 ~ 45585330 (+) False G58971
AMCG00009750 mRNA upstream 31197 45466659 ~ 45476997 (+) True AMCG00009750
AMCG00009752 mRNA upstream 54215 45437969 ~ 45453979 (+) True AMCG00009752
AMCG00009751 mRNA upstream 72329 45422527 ~ 45435865 (+) True AMCG00009751
AMCG00009753 mRNA upstream 112171 45390752 ~ 45396023 (+) True AMCG00009753
AMCG00009743 mRNA upstream 118481 45376438 ~ 45389713 (+) True AMCG00009743
AMCG00009757 mRNA downstream 12249 45521353 ~ 45531436 (+) True AMCG00009757
AMCG00009759 mRNA downstream 51187 45560291 ~ 45572255 (+) False AMCG00009759
AMCG00009760 mRNA downstream 64166 45573270 ~ 45574076 (+) False AMCG00009760
AMCG00009758 mRNA downstream 67435 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009763 mRNA downstream 89503 45598607 ~ 45629378 (+) True AMCG00009763
TU73437 other upstream 450320 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 856227 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 908866 44584562 ~ 44599328 (+) False AMCG00009700
TU73232 other upstream 937663 44567365 ~ 44570531 (+) True AMCG00009694
TU73161 other upstream 1120230 44386497 ~ 44387964 (+) False G58522
TU73611 other downstream 50873 45559977 ~ 45571635 (+) True AMCG00009759
TU73851 other downstream 245482 45754586 ~ 45755115 (+) True G59084

Expression Profile