RNA id: AMCG00009765



Basic Information


Item Value
RNA id AMCG00009765
length 417
RNA type mRNA
GC content 0.57
exon number 3
gene id AMCG00009765
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45650084 ~ 45656237 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGCCCAGCCAAAGAGGGCGTCGGTCCTTTGTAATCTCAGCCATGGCGTGGGTGGGCAGTGAGACCATCGAGACCGCAGCTCTGGGCCGACCCTTCCAACTGGGCATGCTGTACGACTGCCGCAACGACGCCCTGATTCCAGTCAACACAGAATTGCCAGGTGCCATCTTTTTTCTTGACCGCTCCCTCCACCAGGGGCTGTCAGACGTCTTGATCACGCCCACAGTGGACATCTCCTTGATCTTGGCCTCCACAGCCGCCCTCTTCGCCCAAGGCATGTGCCGGGAATACAGATGGGGGTGCAGTCCTGGTGTTGATATCGTGCTGGAACAGGCTGGTGCACGTACAATCTTCATCATGCACCATGAATATGTCCCCAACTCCCCAAGGGGTTTCTTTAGCTGTCGCCTCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73754 lncRNA upstream 10047 45639635 ~ 45640037 (+) True G59006
TU73710 lncRNA upstream 64754 45584758 ~ 45585330 (+) True G58971
TU73711 lncRNA upstream 64754 45584824 ~ 45585330 (+) False G58971
TU73715 lncRNA upstream 65415 45582519 ~ 45584669 (+) False AMCG00009758
TU73708 lncRNA upstream 74120 45573270 ~ 45575964 (+) True AMCG00009760
TU73778 lncRNA downstream 17692 45673929 ~ 45674702 (+) True G59026
TU73780 lncRNA downstream 19466 45675703 ~ 45683641 (+) True G59028
TU73805 lncRNA downstream 45730 45701967 ~ 45702889 (+) True G59047
TU73840 lncRNA downstream 89704 45745941 ~ 45746254 (+) True G59076
TU73845 lncRNA downstream 91283 45747520 ~ 45748462 (+) True G59078
AMCG00009764 mRNA upstream 2543 45643238 ~ 45647541 (+) True AMCG00009764
AMCG00009763 mRNA upstream 20706 45598607 ~ 45629378 (+) True AMCG00009763
AMCG00009758 mRNA upstream 65357 45576539 ~ 45584727 (+) True AMCG00009758
AMCG00009760 mRNA upstream 76008 45573270 ~ 45574076 (+) False AMCG00009760
AMCG00009759 mRNA upstream 77829 45560291 ~ 45572255 (+) False AMCG00009759
AMCG00009762 mRNA downstream 524 45656761 ~ 45660486 (+) True AMCG00009762
AMCG00009772 mRNA downstream 219396 45875633 ~ 45879015 (+) True AMCG00009772
AMCG00009778 mRNA downstream 248650 45904887 ~ 45913188 (+) True AMCG00009778
AMCG00009780 mRNA downstream 263194 45919431 ~ 45921344 (+) True AMCG00009780
AMCG00009782 mRNA downstream 324852 45981089 ~ 45993288 (+) True AMCG00009782
TU73611 other upstream 78449 45559977 ~ 45571635 (+) True AMCG00009759
TU73602 other upstream 140980 45508194 ~ 45509104 (+) False AMCG00009761
TU73437 other upstream 592210 45056065 ~ 45057874 (+) True G58747
TU73251 other upstream 998117 44632750 ~ 44651967 (+) True G58600
TU73244 other upstream 1050756 44584562 ~ 44599328 (+) False AMCG00009700
TU73851 other downstream 98349 45754586 ~ 45755115 (+) True G59084

Expression Profile