RNA id: TU73753


Basic Information

Item Value
RNA id TU73753
length 244
lncRNA type sense_over
GC content 0.54
exon number 2
gene id AMCG00009766
representative False

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45637747 ~ 45642744 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGAGGGACAGTGATCCCACTGACCCCAAGCGGGAGACCATTGTCCAGCTGATCGACGACTTCAAGATTTCAGGGGTCAATGGAGTGCATGTGTGTATGGTGCTGGAGGTTCTGGGCCACCAGCTGCTGAAGTGGATCATCAAGTCCAACTACATGGGGCTGCCCATGCCTTGTGTCAAGAGCATCCTCCGacaggtacagcacagcactaatACGCAGCATaacagcactacagcacagctct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73751 lncRNA downstream 2048 45635390 ~ 45635699 (-) True G59003
TU73750 lncRNA downstream 2433 45634682 ~ 45635314 (-) True G59002
TU73729 lncRNA downstream 8374 45591747 ~ 45629373 (-) True G58982
TU73730 lncRNA downstream 8374 45602221 ~ 45629373 (-) False G58982
TU73723 lncRNA downstream 52376 45584803 ~ 45585371 (-) True G58978
TU73755 lncRNA upstream 1171 45639279 ~ 45640110 (-) True AMCG00009766
TU73774 lncRNA upstream 26366 45664474 ~ 45664841 (-) True G59022
TU73798 lncRNA upstream 37595 45675703 ~ 45680120 (-) True G59042
TU73841 lncRNA upstream 107833 45745941 ~ 45746254 (-) True G59077
TU73857 lncRNA upstream 109449 45747557 ~ 45748458 (-) True G59090
AMCG00009755 mRNA downstream 175035 45458743 ~ 45462712 (-) True AMCG00009755
AMCG00009756 mRNA downstream 179377 45457812 ~ 45458370 (-) True AMCG00009756
AMCG00009754 mRNA downstream 235332 45397189 ~ 45402415 (-) True AMCG00009754
AMCG00009745 mRNA downstream 286567 45345981 ~ 45351180 (-) True AMCG00009745
AMCG00009748 mRNA downstream 311692 45320757 ~ 45326055 (-) False AMCG00009748
AMCG00009767 mRNA upstream 40133 45678241 ~ 45678855 (-) True AMCG00009767
AMCG00009771 mRNA upstream 45452 45683560 ~ 45695262 (-) True AMCG00009771
AMCG00009770 mRNA upstream 63825 45701933 ~ 45704510 (-) True AMCG00009770
AMCG00009768 mRNA upstream 67759 45705867 ~ 45738830 (-) True AMCG00009768
AMCG00009769 mRNA upstream 110568 45748676 ~ 45757951 (-) True AMCG00009769
TU73631 other downstream 313797 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other downstream 314425 45320843 ~ 45323322 (-) False AMCG00009748
TU73318 other downstream 852613 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 1070913 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 1094938 44541894 ~ 44542809 (-) True G58584

Expression Profile