RNA id: TU73755


Basic Information

Item Value
RNA id TU73755
length 832
lncRNA type sense_over
GC content 0.43
exon number 1
gene id AMCG00009766
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45637747 ~ 45642744 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTACAGAGagatacagcacagcacactgcggTACAGAAGGTACAGCACAGTTACAGCAGTGTTGTCCCTCCCCCAGGTCCTGCAGGGTCTGGACTACTTGCACACCAAGTGTAAGATCATCCACACGGATATCAAGCCGGAGAACATCCTGATGTGTGTGGATGACGTCTACATCCGCCGCATGGCCGCCGAGGCCACAGTGTGGCAGCAGTCCGGCGCACCCCCCCCCTCTGGGTCCTCAGGTAAAGGCTGGTTAATACTTATACATGTGTGGGCATCGTACGCAGACGGTCGCACAGCTGTCTGCTAGCACACTTGCACGTAAGGTTGACGTGTCCATAGGAGGCAGTGTTGCATTAACACTGCCATCTACAGACACGAAACCCAATTTCTATGGTGCATCTgtgattgtatggatgtaaattaacacactGTTAaagacatgttacagaaactacacgcacacacacaaatacaaattgcatcctgtatgtgtagatctatattgtcttgctatagttggctagagacttaacacaagaacataaacacacatatctGCGTATGTGCATTTATCCTGCTTATCCGttcttatgttactaaatatttgaatccaatacatatacagcatttcagctgttaaactcctcaaaattaacCGCCAGACCCGCACTTCATGTCATAGGCTTTAGcccactgaataatataataaatatagcccacaatatgggctttgtaatcaaattaatgttgattggtgaaacacgctATTTTCTACAcgtcatatattaattattatcattatttattgtattacatttgcacctgatat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73753 lncRNA downstream 1171 45637747 ~ 45638108 (-) False AMCG00009766
TU73751 lncRNA downstream 3580 45635390 ~ 45635699 (-) True G59003
TU73750 lncRNA downstream 3965 45634682 ~ 45635314 (-) True G59002
TU73729 lncRNA downstream 9906 45591747 ~ 45629373 (-) True G58982
TU73730 lncRNA downstream 9906 45602221 ~ 45629373 (-) False G58982
TU73774 lncRNA upstream 24364 45664474 ~ 45664841 (-) True G59022
TU73798 lncRNA upstream 35593 45675703 ~ 45680120 (-) True G59042
TU73841 lncRNA upstream 105831 45745941 ~ 45746254 (-) True G59077
TU73857 lncRNA upstream 107447 45747557 ~ 45748458 (-) True G59090
TU73855 lncRNA upstream 109996 45750106 ~ 45750973 (-) False AMCG00009769
AMCG00009755 mRNA downstream 176567 45458743 ~ 45462712 (-) True AMCG00009755
AMCG00009756 mRNA downstream 180909 45457812 ~ 45458370 (-) True AMCG00009756
AMCG00009754 mRNA downstream 236864 45397189 ~ 45402415 (-) True AMCG00009754
AMCG00009745 mRNA downstream 288099 45345981 ~ 45351180 (-) True AMCG00009745
AMCG00009748 mRNA downstream 313224 45320757 ~ 45326055 (-) False AMCG00009748
AMCG00009767 mRNA upstream 38131 45678241 ~ 45678855 (-) True AMCG00009767
AMCG00009771 mRNA upstream 43450 45683560 ~ 45695262 (-) True AMCG00009771
AMCG00009770 mRNA upstream 61823 45701933 ~ 45704510 (-) True AMCG00009770
AMCG00009768 mRNA upstream 65757 45705867 ~ 45738830 (-) True AMCG00009768
AMCG00009769 mRNA upstream 108566 45748676 ~ 45757951 (-) True AMCG00009769
TU73631 other downstream 315329 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other downstream 315957 45320843 ~ 45323322 (-) False AMCG00009748
TU73318 other downstream 854145 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 1072445 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 1096470 44541894 ~ 44542809 (-) True G58584

Expression Profile