RNA id: AMCG00009776


Basic Information

Item Value
RNA id AMCG00009776
length 1824
RNA type mRNA
GC content 0.66
exon number 8
gene id AMCG00009776
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45774869 ~ 45781213 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCGCCCCCCCCACGCTCCGAGGCCTCATCCCCGGGAGACAGCGCCCCCCCCGCCCTGAGAGCCGGAGCACAGAGGCTGCAGGCAGGAGGTGGATATTTTGGCCTAACCTTTACTTGTCCTAGTCTCAAAAACCCTGTTAGCAAGAAATCCTGGACTCGCAAATTGAAAAGCTGGGCATGCAAGCTCCGCCACTCCTCCAGCTTATTCAAGAGGTCCAGAGTCCAGCAAGagagCTCAGGGCTGCAGGGCCACACAGGCCCGATTCAGGGGGAGGTGAGGATGCGCTCGCAGTCTCTGACCACCGGGAGATTCcagGTCACCAAGGTGCCCCAGCCGTCCCCACGAGACACAGACAGAGCGACGGAGGGGGACGCCAGAGATGGGCGTGGAGATGGAGAGTGGCCGAGAGAGAGGCAgttggagagggagagggagggcaaTGGAGAGCGAGGAAGGGGGGTGGGGACCGGCTGCCCAGAAACCCCTCAGCCCACCGCAGAAACAGGGCCCCCCCTGCTGCACCAAACAGTGGGCCGATTCTCTGTGACGCGGGCACCCAGCCAGGACCCCGCAGGCCCCACGCCCCCCAGCCCGGGCCAAAAGGAagggggcagcagcagcagcagcagcagcgggggtggggtggggggctggcCGGGCCCTGCTGCCGCTCccacacagaggagagagagggaggaggtggcaggagagggggatgaggaggacgaggaggaggaggaagaggaggacaaGAGGACCGCCCCTCCCCGCCCCCCCTGGGGGtactccccctccccccccatgAGCAGCGACGAGGAGGAGTCGGAGCTGGAGGACGAGGACCTGAGGAAGGAGCTGCACCGGCTGAGAGAGAAgcacatCCAGGAGGTGGTGTGTCTGCAGGCGCAGCAGAGCCGGGAGCTGCAGGAGCTCTACTGCCAGCTGCGTCTGCTGAAGGAACGCCGCgccccccccgccacccccacacccccgcACTGCCTGTCTCCGCGGCGACCGCGCGCAGCCAAGGCCAAGATGCGCAGCCGCCCGCAGTCCTGCTCGCAGACCGACAACGGGCTGGCCAACGCAGGTGTCCAGCAGTCCTGCAGTGTATCAGCCCCCACACACCCCGGAAAAGAGGAGTCTCTGGGATCTCTTGGGGGCCCCCACAGCCACAGCTGCCCCCAGGgaCTCACAGCACAATGCTCCCCCAGCCACGCCCCTGCCTCCGGCTCGGCCAATAAGAAGGGCATGTTCACGGACGAGCTGCACAAGCTGGTTGATGATTGGACGAAGGAGACTGTGGGCAACGCCCTTGCCAAGCCCAGCCTCAACCAGATCAAGCAGATCCAGCAGAAGCAGGAGATTGGTGTCTGGAACCAGCCAACCGAGGGCGGTGCGTCTACCTGGTTCTCCCCTCTCCCTGCGGTCCAGCCCTGTGCAGTCGGCGGTCTCCCAGCTGCACCGGCTCCCTGCACCGTCTCCCCAGCGCCCCCCACAGCAGCCCCTGGGGTCGGGGGGGTCGTCCCGGGGATAGGGTATGCGCTGCAGTGGTCTGCGCTGCTGACAaccacacagcagcagcagcagcccagtCACATCCAGCCACCCCTGGCcacctcccctcctcagccagCCATGGGGACGCCCCCCTCGAACCTGGCTGCACCCCCTCCTAGATCTtgctctccctcttcttcctcctcctcctcctcctcctccagctcctcttcctcctccggATCCTCCTCTCTGGCTGCGTCCCCTCAGACGCTGGCGGCCAGGGAGCTGGATCAGACTGGATCAATCAGTCTATCGCCTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73869 lncRNA downstream 11729 45759711 ~ 45763140 (-) True G59099
TU73855 lncRNA downstream 23896 45750106 ~ 45750973 (-) False AMCG00009769
TU73857 lncRNA downstream 26411 45747557 ~ 45748458 (-) True G59090
TU73841 lncRNA downstream 28615 45745941 ~ 45746254 (-) True G59077
TU73798 lncRNA downstream 94749 45675703 ~ 45680120 (-) True G59042
TU74008 lncRNA upstream 126041 45907254 ~ 45908142 (-) True G59191
TU74023 lncRNA upstream 127368 45908581 ~ 45915868 (-) True G59202
TU74025 lncRNA upstream 127368 45908581 ~ 45964055 (-) False G59202
TU74073 lncRNA upstream 280280 46061493 ~ 46112681 (-) True G59236
TU74082 lncRNA upstream 341062 46122275 ~ 46175968 (-) True G59244
AMCG00009773 mRNA downstream 3620 45763177 ~ 45771249 (-) True AMCG00009773
AMCG00009769 mRNA downstream 16918 45748676 ~ 45757951 (-) True AMCG00009769
AMCG00009768 mRNA downstream 36039 45705867 ~ 45738830 (-) True AMCG00009768
AMCG00009770 mRNA downstream 70359 45701933 ~ 45704510 (-) True AMCG00009770
AMCG00009771 mRNA downstream 79607 45683560 ~ 45695262 (-) True AMCG00009771
AMCG00009777 mRNA upstream 1030 45782243 ~ 45799948 (-) True AMCG00009777
AMCG00009775 mRNA upstream 20189 45801402 ~ 45811884 (-) True AMCG00009775
AMCG00009774 mRNA upstream 84687 45865900 ~ 45869735 (-) True AMCG00009774
AMCG00009779 mRNA upstream 115881 45897094 ~ 45905338 (-) True AMCG00009779
AMCG00009783 mRNA upstream 251901 46033114 ~ 46052896 (-) True AMCG00009783
TU73631 other downstream 450919 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other downstream 451547 45320843 ~ 45323322 (-) False AMCG00009748
TU73318 other downstream 989735 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 1208035 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 1232060 44541894 ~ 44542809 (-) True G58584

Expression Profile