RNA id: TU62058


Basic Information

Item Value
RNA id TU62058
length 205
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G49614
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2974949 ~ 2975153 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGACACTGTCTATCCTGCTAGATTATACTATTAACAGTTTAACCACACTAGGCCATAACAGTCCAGGATATACGCTATCGTACAGGACTAAATTAACCCCAGAGTAAAGCGGACGTTTACAAAATCGGCCTGCCAAGGGTTAAAAATGATATTGCCGTCGTCTTGTTTGGTAGGAAGGGGGAGGTAGGAAATGGAAGTGATAGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU62048 lncRNA downstream 64321 2909662 ~ 2910628 (-) True G49606
TU61973 lncRNA downstream 150973 2823241 ~ 2823976 (-) True G49547
TU61913 lncRNA downstream 272527 2636915 ~ 2702422 (-) True AMCG00008491
TU61850 lncRNA downstream 538192 2377005 ~ 2436757 (-) True G49462
TU61803 lncRNA downstream 614837 2359860 ~ 2360112 (-) True G49419
TU62306 lncRNA upstream 398391 3373544 ~ 3379324 (-) True G49802
TU62310 lncRNA upstream 415050 3390203 ~ 3392090 (-) True G49806
TU62317 lncRNA upstream 439028 3414181 ~ 3443909 (-) True G49811
TU62315 lncRNA upstream 450629 3425782 ~ 3437347 (-) True G49810
TU62322 lncRNA upstream 455661 3430814 ~ 3863106 (-) True AMCG00008554
AMCG00008508 mRNA downstream 24949 2922885 ~ 2950000 (-) True AMCG00008508
AMCG00008507 mRNA downstream 61160 2910977 ~ 2913789 (-) True AMCG00008507
AMCG00008506 mRNA downstream 71754 2886767 ~ 2903195 (-) True AMCG00008506
AMCG00008502 mRNA downstream 102898 2854383 ~ 2872051 (-) True AMCG00008502
AMCG00008504 mRNA downstream 129058 2839095 ~ 2845891 (-) True AMCG00008504
AMCG00008512 mRNA upstream 36704 3011857 ~ 3014067 (-) True AMCG00008512
AMCG00008513 mRNA upstream 46590 3021743 ~ 3023525 (-) True AMCG00008513
AMCG00008511 mRNA upstream 53516 3028669 ~ 3029688 (-) True AMCG00008511
AMCG00008519 mRNA upstream 129453 3104606 ~ 3111684 (-) True AMCG00008519
AMCG00008520 mRNA upstream 141672 3116825 ~ 3121999 (-) True AMCG00008520
TU62046 other downstream 66284 2906675 ~ 2908665 (-) True G49605
TU61772 other downstream 889943 2078703 ~ 2085006 (-) True AMCG00008474
TU61724 other downstream 1093987 1879621 ~ 1880962 (-) True G49375
TU61698 other downstream 1124667 1798845 ~ 1850282 (-) False AMCG00008462
TU61344 other downstream 2034297 931892 ~ 940652 (-) False AMCG00008428
TU62371 other upstream 799430 3774583 ~ 3777354 (-) True AMCG00008547
TU62870 other upstream 2773737 5748890 ~ 5885450 (-) True G50267
TU62882 other upstream 2812597 5787750 ~ 5792584 (-) False AMCG00008608
TU63135 other upstream 3972736 6947889 ~ 7151472 (-) False G50476
TU63134 other upstream 4170472 7145625 ~ 7151472 (-) True G50476

Expression Profile