Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU62800 |
| length | 307 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G50206 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 5579222 ~ 5580022 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005201 | extracellular matrix structural constituent | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62788 | lncRNA | upstream | 18613 | 5560021 ~ 5560609 (+) | True | G50196 |
| TU62777 | lncRNA | upstream | 156177 | 5422823 ~ 5423045 (+) | True | G50185 |
| TU62770 | lncRNA | upstream | 423738 | 5149895 ~ 5155484 (+) | True | G50181 |
| TU62769 | lncRNA | upstream | 429365 | 5149468 ~ 5149857 (+) | True | G50180 |
| TU62739 | lncRNA | upstream | 608974 | 4970009 ~ 4970248 (+) | True | G50153 |
| TU62807 | lncRNA | downstream | 6778 | 5586800 ~ 5591201 (+) | True | G50212 |
| TU62808 | lncRNA | downstream | 12414 | 5592436 ~ 5592931 (+) | True | G50213 |
| TU62809 | lncRNA | downstream | 14690 | 5594712 ~ 5595052 (+) | True | G50214 |
| TU62856 | lncRNA | downstream | 361185 | 5941207 ~ 5941527 (+) | True | G50255 |
| TU62949 | lncRNA | downstream | 762672 | 6342694 ~ 6342978 (+) | True | G50336 |
| AMCG00008594 | mRNA | upstream | 470418 | 5094364 ~ 5108804 (+) | True | AMCG00008594 |
| AMCG00008593 | mRNA | upstream | 523466 | 5042754 ~ 5055756 (+) | True | AMCG00008593 |
| AMCG00008590 | mRNA | upstream | 675149 | 4899445 ~ 4904073 (+) | True | AMCG00008590 |
| AMCG00008587 | mRNA | upstream | 743566 | 4824127 ~ 4835656 (+) | True | AMCG00008587 |
| AMCG00008588 | mRNA | upstream | 766315 | 4800454 ~ 4812907 (+) | True | AMCG00008588 |
| AMCG00008601 | mRNA | downstream | 34897 | 5614919 ~ 5635748 (+) | True | AMCG00008601 |
| AMCG00008606 | mRNA | downstream | 164782 | 5744804 ~ 5757635 (+) | True | AMCG00008606 |
| AMCG00008605 | mRNA | downstream | 186742 | 5766764 ~ 5776682 (+) | True | AMCG00008605 |
| AMCG00008607 | mRNA | downstream | 264323 | 5844345 ~ 5847681 (+) | True | AMCG00008607 |
| AMCG00008604 | mRNA | downstream | 301971 | 5881993 ~ 5883048 (+) | True | AMCG00008604 |
| TU62655 | other | upstream | 1006488 | 4561991 ~ 4572734 (+) | True | AMCG00008580 |
| TU62530 | other | upstream | 1413739 | 4162058 ~ 4165483 (+) | True | G49982 |
| TU62528 | other | upstream | 1419160 | 4156088 ~ 4160062 (+) | True | G49980 |
| TU62012 | other | upstream | 2690326 | 2886766 ~ 2888896 (+) | True | G49583 |
| TU61936 | other | upstream | 2809178 | 2765879 ~ 2770044 (+) | True | G49523 |
| TU62810 | other | downstream | 16001 | 5596023 ~ 5596799 (+) | True | G50215 |
| TU62843 | other | downstream | 158519 | 5738541 ~ 5742750 (+) | True | G50243 |
| TU63090 | other | downstream | 1377589 | 6957611 ~ 7018125 (+) | True | G50448 |
| TU63267 | other | downstream | 2353807 | 7933829 ~ 7939771 (+) | True | G50583 |
| TU63268 | other | downstream | 2353807 | 7933829 ~ 7939771 (+) | False | G50583 |
