RNA id: TU63287


Basic Information

Item Value
RNA id TU63287
length 423
RNA type TUCP
GC content 0.44
exon number 4
gene id G50602
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 7901335 ~ 7902606 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGTTTGCTTTTGGTTGACACCAATACAGCTGCCCCTATTACCACAATGCATGAGGAAGGATCAGGTTATCCTGAGACTGAAACCCCTACAACTAAACCTCCTACCTCAAACACAGCTCCCACTGTGTCCTCAAatAATGTGGCTGAAACCGTAACAGCTCCCACAAGCAATACACCTACAGTTCTAGTGACAGACACCACCGCCACAACAACTACTGTAACTACAGCTCTAgctacaacaaacaaaataacaaacccAATACTTATAACAGAAGGAAAATATCTCAATGACACTAACACAACTACAGCAACATCTACAACCCAAACATCCTCAGCTGCAACGTCAATAGAAACAACTGAATTTCCACCTATAATGCCGGTCATCGCTGTCCTGAGACTGGAGTTCAACAGCAATAACCCTGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU63233 lncRNA downstream 225149 7668848 ~ 7676186 (-) True G50560
TU63231 lncRNA downstream 238893 7662152 ~ 7662442 (-) True G50558
TU63230 lncRNA downstream 243944 7654080 ~ 7657391 (-) True G50557
TU63185 lncRNA downstream 521848 7379038 ~ 7379487 (-) True G50514
TU63163 lncRNA downstream 534405 7366625 ~ 7366930 (-) True G50496
TU63298 lncRNA upstream 69996 7972602 ~ 7973752 (-) True G50611
TU63303 lncRNA upstream 82134 7984740 ~ 7984951 (-) True G50615
TU63323 lncRNA upstream 103032 8005638 ~ 8104803 (-) True G50632
TU63340 lncRNA upstream 196166 8098772 ~ 8099445 (-) True G50646
TU63341 lncRNA upstream 202766 8105372 ~ 8105602 (-) True G50647
AMCG00008655 mRNA downstream 39799 7819151 ~ 7861536 (-) True AMCG00008655
AMCG00008650 mRNA downstream 155031 7728099 ~ 7746304 (-) True AMCG00008650
AMCG00008646 mRNA downstream 358448 7527549 ~ 7542887 (-) True AMCG00008646
AMCG00008647 mRNA downstream 383493 7434320 ~ 7517842 (-) True AMCG00008647
AMCG00008642 mRNA downstream 498515 7387052 ~ 7402820 (-) True AMCG00008642
AMCG00008654 mRNA upstream 134426 8037032 ~ 8075024 (-) True AMCG00008654
AMCG00008658 mRNA upstream 237445 8140051 ~ 8146234 (-) True AMCG00008658
AMCG00008662 mRNA upstream 281845 8184451 ~ 8190177 (-) False AMCG00008662
AMCG00008660 mRNA upstream 289646 8192252 ~ 8207177 (-) True AMCG00008660
AMCG00008659 mRNA upstream 329073 8231679 ~ 8244280 (-) True AMCG00008659
TU63135 other downstream 749863 6947889 ~ 7151472 (-) False G50476
TU63134 other downstream 749863 7145625 ~ 7151472 (-) True G50476
TU62870 other downstream 2015885 5748890 ~ 5885450 (-) True G50267
TU62882 other downstream 2108751 5787750 ~ 5792584 (-) False AMCG00008608
TU62371 other downstream 4123981 3774583 ~ 3777354 (-) True AMCG00008547
TU63350 other upstream 231975 8134581 ~ 8135414 (-) True G50656
TU63425 other upstream 366417 8269023 ~ 8269326 (-) True G50710
TU63428 other upstream 367718 8270324 ~ 8274515 (-) True G50712
TU63429 other upstream 367718 8270324 ~ 8294354 (-) False G50712
TU63430 other upstream 389193 8291799 ~ 8294354 (-) False G50712

Expression Profile