RNA id: TU63703



Basic Information


Item Value
RNA id TU63703
length 601
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G50929
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9191777 ~ 9192377 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatgtaaataaatacatcttgtaatttttccatttgatttgcattgttatttGCAGTTCCATTCATACAACAGTTATTTCTATGGCCATCATCCAGTACTCAGAGTCGGCTGGCAGTcagtgaagatttatttttgaggAAAGGTCGGTCAGGCTGaataaagttatattttaaatagtgaaaCTACTTATTCCATGGGTGTAAGTTTAGAatggactttttatttttaaatataaactaaaagATACATTTTCGGTAACCAGAGGGctgatttttttctgttcctcaCTCTTGCCAGACTGTAGCATTACCCTGGGTAAAACAATTTGATATCTGCCCCACATGCATAACTTGGAACACTGCttgacatttcaaataaacagcagGATTTTAATGGCCAGCATCCGAATTTAGAAGCAGTAGGTAGGATGACAATATAACGGGCACAGTAACCCACAACAGTCTTCCATGTTAATCTGTTTGGAGCTGGTTTCTCAGATAGCCTGGGACTACAGGTCACTGAACCCAATCCcgttattatggttattaatTTCCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63641 lncRNA upstream 196874 8994536 ~ 8994903 (+) True G50878
TU63573 lncRNA upstream 382386 8803206 ~ 8809391 (+) True G50823
TU63486 lncRNA upstream 602649 8572729 ~ 8589128 (+) True G50757
TU63420 lncRNA upstream 866999 8278853 ~ 8324778 (+) False AMCG00008664
TU63421 lncRNA upstream 900976 8278853 ~ 8290801 (+) False AMCG00008664
TU63704 lncRNA downstream 153 9192530 ~ 9192919 (+) True G50930
TU63705 lncRNA downstream 638 9193015 ~ 9193685 (+) True G50931
TU63706 lncRNA downstream 2027 9194404 ~ 9194638 (+) True G50932
TU63764 lncRNA downstream 160601 9352978 ~ 9354405 (+) True G50983
TU63777 lncRNA downstream 176755 9369132 ~ 9379579 (+) True AMCG00008707
AMCG00008701 mRNA upstream 7247 9175620 ~ 9184530 (+) True AMCG00008701
AMCG00008695 mRNA upstream 59539 9123241 ~ 9132238 (+) True AMCG00008695
AMCG00008696 mRNA upstream 70110 9116675 ~ 9121667 (+) False AMCG00008696
AMCG00008688 mRNA upstream 278435 8903214 ~ 8913342 (+) True AMCG00008688
AMCG00008685 mRNA upstream 310609 8866279 ~ 8881168 (+) True AMCG00008685
AMCG00008700 mRNA downstream 77985 9270362 ~ 9282607 (+) True AMCG00008700
AMCG00008706 mRNA downstream 98311 9290688 ~ 9309599 (+) True AMCG00008706
AMCG00008710 mRNA downstream 120850 9313227 ~ 9315306 (+) False AMCG00008710
AMCG00008708 mRNA downstream 146454 9338831 ~ 9350517 (+) True AMCG00008708
AMCG00008707 mRNA downstream 162715 9355092 ~ 9377055 (+) False AMCG00008707
TU63657 other upstream 68965 9116737 ~ 9122812 (+) True AMCG00008696
TU63666 other upstream 103810 9081827 ~ 9087967 (+) True G50900
TU63473 other upstream 525229 8450166 ~ 8666548 (+) True G50747
TU63407 other upstream 874175 8313425 ~ 8317602 (+) True AMCG00008664
TU63267 other upstream 1252006 7933829 ~ 7939771 (+) True G50583
TU63743 other downstream 117709 9310086 ~ 9316151 (+) False AMCG00008710
TU63744 other downstream 117709 9310086 ~ 9316151 (+) False AMCG00008710
TU63745 other downstream 117709 9310086 ~ 9316151 (+) True AMCG00008710
TU63913 other downstream 737101 9929478 ~ 9931081 (+) False AMCG00008727
TU63914 other downstream 737101 9929478 ~ 9931081 (+) False AMCG00008727

Expression Profile