RNA id: TU63792


Basic Information

Item Value
RNA id TU63792
length 360
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G51006
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9389211 ~ 9389570 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGTGAGCGTGGAGCTGGAGGGAGGGTTCAGGCTGTCGCAGCTGTCAGCGCTGTCGCTGCTGGAGATCTCATCATCCGAGTCCTTGGGAGTGGAGTAGGGCGAGCCGCTGTCCACCTCCTCAAATCGCCTCTTCAGACCGAGCCCCGACACCGCCTCCATCAGACCCCGCCGCCTGCACACGCAACACACAACACGCAACGACAACCACACAACAGTGTAGCTCAGGCCTCGGCCACCAGCGTCAACTCAGATCAAGAAGATACATCGGTGTACCACAAGAGGGACGTTGGAGTCAGTGGACCACAACCCTGTAGGACACACCATAATGAAGAGGGGTTTCAAATTTAGGTTGATTGTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU63791 lncRNA downstream 163 9388824 ~ 9389048 (-) True G51005
TU63790 lncRNA downstream 603 9388258 ~ 9388608 (-) True G51004
TU63788 lncRNA downstream 7457 9380751 ~ 9381754 (-) True G51002
TU63785 lncRNA downstream 9759 9376572 ~ 9379452 (-) True G50999
TU63686 lncRNA downstream 239273 9144344 ~ 9149938 (-) True G50915
TU63793 lncRNA upstream 214 9389784 ~ 9390161 (-) True G51007
TU63804 lncRNA upstream 20189 9409759 ~ 9410974 (-) True G51015
TU63838 lncRNA upstream 131784 9521354 ~ 9525687 (-) True G51044
TU63852 lncRNA upstream 187698 9577268 ~ 9578383 (-) True G51057
TU63883 lncRNA upstream 349076 9738646 ~ 9739256 (-) True G51081
AMCG00008709 mRNA downstream 62492 9321577 ~ 9326719 (-) True AMCG00008709
AMCG00008703 mRNA downstream 101524 9283550 ~ 9287687 (-) True AMCG00008703
AMCG00008704 mRNA downstream 133557 9232126 ~ 9255654 (-) True AMCG00008704
AMCG00008702 mRNA downstream 159752 9223114 ~ 9229459 (-) True AMCG00008702
AMCG00008705 mRNA downstream 183819 9197433 ~ 9205392 (-) True AMCG00008705
AMCG00008713 mRNA upstream 24128 9413698 ~ 9417891 (-) True AMCG00008713
AMCG00008717 mRNA upstream 142263 9531833 ~ 9554934 (-) True AMCG00008717
AMCG00008719 mRNA upstream 173330 9562900 ~ 9565171 (-) True AMCG00008719
AMCG00008718 mRNA upstream 189819 9579389 ~ 9587169 (-) True AMCG00008718
AMCG00008723 mRNA upstream 350714 9740284 ~ 9757947 (-) True AMCG00008723
TU63526 other downstream 729194 8656728 ~ 8660017 (-) True G50788
TU63463 other downstream 1017881 8367916 ~ 8371330 (-) True G50739
TU63429 other downstream 1094857 8270324 ~ 8294354 (-) False G50712
TU63430 other downstream 1094857 8291799 ~ 8294354 (-) False G50712
TU63428 other downstream 1114696 8270324 ~ 8274515 (-) True G50712
TU63794 other upstream 1273 9390843 ~ 9393227 (-) True G51008
TU64089 other upstream 1183913 10573483 ~ 10603373 (-) False AMCG00008744
TU64119 other upstream 1287693 10677263 ~ 10718201 (-) False AMCG00008748
TU64120 other upstream 1287693 10677263 ~ 10700483 (-) True AMCG00008748
TU64105 other upstream 1290708 10680278 ~ 10712485 (-) False G51241

Expression Profile