RNA id: TU63867



Basic Information


Item Value
RNA id TU63867
length 339
lncRNA type read_through
GC content 0.45
exon number 2
gene id G51065
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 9640756 ~ 9715167 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGAACGGTGGCTTCTGACAGGTCTTGGATGGTACTGATATTGAACAAGGGAAGATCCATTCTAGGTCTGTGAAGAGAGATCCTATTTGATCTGGACCAGAAGGTCACAGCGCCCCTGAAACTGAGACCTTGTGTATTGTGGACGAGACCTCTACTGGCTCATAATGAATCTGTGAGGAGCATCGCCGTTGGGTTTAACTAAGATCTGAGTGCCAGTTTCTGCAGACTAAACACTGGTAAATGGTGCGAATGCACTTTTTGGATTCTGCCCAACAGGGGTCCTGTTCTAGCTGCACTTGTCTTTATTCTCTATATATcactgtcttttttttttttcttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63786 lncRNA upstream 242387 9392027 ~ 9398369 (+) True G51000
TU63777 lncRNA upstream 261177 9369132 ~ 9379579 (+) True AMCG00008707
TU63764 lncRNA upstream 286351 9352978 ~ 9354405 (+) True G50983
TU63706 lncRNA upstream 446118 9194404 ~ 9194638 (+) True G50932
TU63705 lncRNA upstream 447071 9193015 ~ 9193685 (+) True G50931
TU63900 lncRNA downstream 76971 9792138 ~ 9794219 (+) True G51094
TU63911 lncRNA downstream 200327 9915494 ~ 9937752 (+) False AMCG00008725
TU63938 lncRNA downstream 258129 9973296 ~ 9975207 (+) True G51129
TU63944 lncRNA downstream 264231 9979398 ~ 10071199 (+) True G51134
TU63971 lncRNA downstream 505066 10220233 ~ 10222915 (+) True G51157
AMCG00008720 mRNA upstream 1510 9621109 ~ 9639246 (+) True AMCG00008720
AMCG00008714 mRNA upstream 103299 9531791 ~ 9537457 (+) True AMCG00008714
AMCG00008716 mRNA upstream 111084 9527898 ~ 9529672 (+) True AMCG00008716
AMCG00008715 mRNA upstream 115069 9488495 ~ 9525687 (+) True AMCG00008715
AMCG00008711 mRNA upstream 231998 9400486 ~ 9408758 (+) True AMCG00008711
AMCG00008726 mRNA downstream 146652 9861819 ~ 9910773 (+) True AMCG00008726
AMCG00008725 mRNA downstream 200327 9915494 ~ 9925896 (+) True AMCG00008725
AMCG00008727 mRNA downstream 212220 9927387 ~ 9931515 (+) True AMCG00008727
AMCG00008736 mRNA downstream 502171 10217338 ~ 10219366 (+) True AMCG00008736
AMCG00008738 mRNA downstream 543279 10258446 ~ 10275211 (+) True AMCG00008738
TU63743 other upstream 324605 9310086 ~ 9316151 (+) False AMCG00008710
TU63744 other upstream 324605 9310086 ~ 9316151 (+) False AMCG00008710
TU63745 other upstream 324605 9310086 ~ 9316151 (+) True AMCG00008710
TU63657 other upstream 517944 9116737 ~ 9122812 (+) True AMCG00008696
TU63666 other upstream 552789 9081827 ~ 9087967 (+) True G50900
TU63913 other downstream 214311 9929478 ~ 9931081 (+) False AMCG00008727
TU63914 other downstream 214311 9929478 ~ 9931081 (+) False AMCG00008727
TU64057 other downstream 990311 10705478 ~ 10707093 (+) False AMCG00008749
TU64201 other downstream 1269723 10984890 ~ 11040674 (+) False G51297
TU64384 other downstream 1745196 11460363 ~ 11465488 (+) True G51445

Expression Profile