RNA id: TU64131



Basic Information


Item Value
RNA id TU64131
length 202
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G51252
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10803906 ~ 10804107 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCTATcataattgattttattatcaTAGTAAAGTATGGAAAGCATATTGACAGTAATATAAATCATGGCACACTGAATCTAACTACACAATCGCACAGCCTAAATCCAATCACAGTACAAGGCCAGCCAACAAAATCAATGTCTTATTTACAGTCTTTTTGAACTAGATCTACCCAAGATAAGTTTGCTTCtacaataaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64061 lncRNA upstream 32231 10768653 ~ 10771675 (+) False AMCG00008749
TU64058 lncRNA upstream 85744 10692377 ~ 10718162 (+) False AMCG00008749
TU64082 lncRNA upstream 91421 10675565 ~ 10712485 (+) False G51226
TU64133 lncRNA downstream 40274 10844381 ~ 10846286 (+) False AMCG00008752
TU64136 lncRNA downstream 40274 10844381 ~ 10846286 (+) False AMCG00008752
TU64158 lncRNA downstream 63828 10867935 ~ 10910645 (+) True G51265
TU64180 lncRNA downstream 146970 10951077 ~ 10953420 (+) True G51283
TU64202 lncRNA downstream 216109 11020216 ~ 11024020 (+) False G51298
AMCG00008753 mRNA upstream 234 10797771 ~ 10803672 (+) True AMCG00008753
AMCG00008749 mRNA upstream 84590 10692535 ~ 10719316 (+) True AMCG00008749
AMCG00008746 mRNA upstream 178737 10618726 ~ 10625169 (+) True AMCG00008746
AMCG00008745 mRNA upstream 185741 10611383 ~ 10618165 (+) True AMCG00008745
AMCG00008742 mRNA upstream 491809 10311582 ~ 10312097 (+) True AMCG00008742
AMCG00008752 mRNA downstream 24461 10828568 ~ 10846436 (+) True AMCG00008752
AMCG00008754 mRNA downstream 90935 10895042 ~ 10906610 (+) True AMCG00008754
AMCG00008755 mRNA downstream 107020 10911127 ~ 10929774 (+) True AMCG00008755
AMCG00008758 mRNA downstream 134132 10938239 ~ 10949947 (+) True AMCG00008758
AMCG00008757 mRNA downstream 145907 10950014 ~ 10950787 (+) True AMCG00008757
TU64057 other upstream 96813 10705478 ~ 10707093 (+) False AMCG00008749
TU63913 other upstream 872825 9929478 ~ 9931081 (+) False AMCG00008727
TU63914 other upstream 872825 9929478 ~ 9931081 (+) False AMCG00008727
TU63744 other upstream 1487755 9310086 ~ 9316151 (+) False AMCG00008710
TU64201 other downstream 180783 10984890 ~ 11040674 (+) False G51297
TU64384 other downstream 656256 11460363 ~ 11465488 (+) True G51445
TU64730 other downstream 1911387 12715494 ~ 12716786 (+) True G51734
TU64761 other downstream 2038608 12842715 ~ 12846233 (+) True G51756
TU64826 other downstream 2121131 12925238 ~ 12926794 (+) True G51812

Expression Profile