Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU64579 |
| length | 1428 |
| lncRNA type | read_through |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G51614 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 12190733 ~ 12249909 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64544 | lncRNA | upstream | 110529 | 12078697 ~ 12080204 (+) | True | G51586 |
| TU64539 | lncRNA | upstream | 113220 | 12075488 ~ 12077513 (+) | True | G51584 |
| TU64537 | lncRNA | upstream | 128444 | 12062074 ~ 12062289 (+) | True | G51582 |
| TU64429 | lncRNA | upstream | 474251 | 11712712 ~ 11716482 (+) | False | G51483 |
| TU64430 | lncRNA | upstream | 474251 | 11712712 ~ 11716482 (+) | True | G51483 |
| TU64639 | lncRNA | downstream | 176024 | 12425933 ~ 12426222 (+) | True | G51665 |
| TU64647 | lncRNA | downstream | 188942 | 12438851 ~ 12439523 (+) | True | G51673 |
| TU64660 | lncRNA | downstream | 254007 | 12503916 ~ 12504176 (+) | True | G51685 |
| TU64650 | lncRNA | downstream | 298151 | 12548060 ~ 12549618 (+) | True | AMCG00008810 |
| TU64687 | lncRNA | downstream | 309562 | 12559471 ~ 12559699 (+) | True | G51710 |
| AMCG00008795 | mRNA | upstream | 47375 | 12132486 ~ 12143358 (+) | True | AMCG00008795 |
| AMCG00008798 | mRNA | upstream | 64131 | 12113384 ~ 12126602 (+) | True | AMCG00008798 |
| AMCG00008791 | mRNA | upstream | 187927 | 11982778 ~ 12002806 (+) | True | AMCG00008791 |
| AMCG00008787 | mRNA | upstream | 356389 | 11833286 ~ 11834344 (+) | True | AMCG00008787 |
| AMCG00008784 | mRNA | upstream | 486325 | 11694841 ~ 11704408 (+) | False | AMCG00008784 |
| AMCG00008804 | mRNA | downstream | 87977 | 12337886 ~ 12338736 (+) | True | AMCG00008804 |
| AMCG00008803 | mRNA | downstream | 108818 | 12358727 ~ 12359365 (+) | True | AMCG00008803 |
| AMCG00008808 | mRNA | downstream | 135671 | 12385580 ~ 12386302 (+) | True | AMCG00008808 |
| AMCG00008809 | mRNA | downstream | 149503 | 12399412 ~ 12415105 (+) | True | AMCG00008809 |
| AMCG00008807 | mRNA | downstream | 172805 | 12422714 ~ 12423406 (+) | True | AMCG00008807 |
| TU64384 | other | upstream | 725245 | 11460363 ~ 11465488 (+) | True | G51445 |
| TU64201 | other | upstream | 1150059 | 10984890 ~ 11040674 (+) | False | G51297 |
| TU64057 | other | upstream | 1483640 | 10705478 ~ 10707093 (+) | False | AMCG00008749 |
| TU63913 | other | upstream | 2259652 | 9929478 ~ 9931081 (+) | False | AMCG00008727 |
| TU64730 | other | downstream | 465585 | 12715494 ~ 12716786 (+) | True | G51734 |
| TU64761 | other | downstream | 592806 | 12842715 ~ 12846233 (+) | True | G51756 |
| TU64826 | other | downstream | 675329 | 12925238 ~ 12926794 (+) | True | G51812 |
| TU64845 | other | downstream | 730895 | 12980804 ~ 12992492 (+) | True | AMCG00008837 |
| TU64968 | other | downstream | 972411 | 13222320 ~ 13224946 (+) | True | G51928 |
