RNA id: TU64607



Basic Information


Item Value
RNA id TU64607
length 203
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G51634
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12343140 ~ 12343342 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCGATTTGCTGACGAACTTCTTTTCTTTGACCCGGCGGTTCTGGAACCAGATGGTGACCTGGCGCTCGGAGAGGTTGGTGGTGGCCGAGATGCGCCGTCGCTTGTCTTTGGTAATGAACTTGCTGGCCGCGTACTCTTTCTCCAACTCCTTCAGCTGGATCTTGGTGTAGGGCACCCGCTTCTTCCGGCCGCGGCGGTAACTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64548 lncRNA downstream 249355 12081212 ~ 12093785 (-) True G51588
TU64527 lncRNA downstream 332746 12002925 ~ 12010394 (-) True G51574
TU64337 lncRNA downstream 1084922 11226487 ~ 11258218 (-) True G51403
TU64280 lncRNA downstream 1178766 11163346 ~ 11164374 (-) True G51354
TU64262 lncRNA downstream 1283214 11057690 ~ 11059926 (-) False G51344
TU64648 lncRNA upstream 95409 12438751 ~ 12439523 (-) True G51674
TU64668 lncRNA upstream 111577 12454919 ~ 12476199 (-) True G51693
TU64677 lncRNA upstream 160120 12503462 ~ 12503679 (-) True G51700
TU64683 lncRNA upstream 196265 12539607 ~ 12540344 (-) True G51706
TU64684 lncRNA upstream 204058 12547400 ~ 12549617 (-) True G51707
AMCG00008802 mRNA downstream 83809 12248300 ~ 12259331 (-) True AMCG00008802
AMCG00008801 mRNA downstream 103081 12237425 ~ 12240059 (-) True AMCG00008801
AMCG00008796 mRNA downstream 181618 12150161 ~ 12161522 (-) True AMCG00008796
AMCG00008797 mRNA downstream 196800 12107882 ~ 12146340 (-) True AMCG00008797
AMCG00008794 mRNA downstream 277024 12035166 ~ 12066116 (-) True AMCG00008794
AMCG00008815 mRNA upstream 257949 12601291 ~ 12605260 (-) True AMCG00008815
AMCG00008817 mRNA upstream 298645 12641987 ~ 12651818 (-) True AMCG00008817
AMCG00008818 mRNA upstream 310271 12653613 ~ 12653945 (-) True AMCG00008818
AMCG00008816 mRNA upstream 322493 12665835 ~ 12668432 (-) True AMCG00008816
AMCG00008822 mRNA upstream 373775 12717117 ~ 12721189 (-) True AMCG00008822
TU64350 other downstream 1016781 11320810 ~ 11326359 (-) False AMCG00008777
TU64340 other downstream 1047390 11235642 ~ 11295750 (-) False AMCG00008777
TU64128 other downstream 1543986 10797632 ~ 10799154 (-) True G51250
TU64105 other downstream 1630655 10680278 ~ 10712485 (-) False G51241
TU64811 other upstream 547469 12890811 ~ 12891597 (-) True G51797
TU64813 other upstream 551993 12895335 ~ 12897134 (-) True G51799
TU64897 other upstream 657484 13000826 ~ 13001888 (-) True G51867
TU64926 other upstream 747195 13090537 ~ 13097934 (-) True AMCG00008845
TU65001 other upstream 914364 13257706 ~ 13261822 (-) True AMCG00008853

Expression Profile