Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU64717 |
| length | 1279 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G51724 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 12657226 ~ 12660117 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64692 | lncRNA | downstream | 53344 | 12601322 ~ 12605140 (-) | False | AMCG00008815 |
| TU64684 | lncRNA | downstream | 108867 | 12547400 ~ 12549617 (-) | True | G51707 |
| TU64683 | lncRNA | downstream | 118140 | 12539607 ~ 12540344 (-) | True | G51706 |
| TU64677 | lncRNA | downstream | 154805 | 12503462 ~ 12503679 (-) | True | G51700 |
| TU64668 | lncRNA | downstream | 182285 | 12454919 ~ 12476199 (-) | True | G51693 |
| TU64823 | lncRNA | upstream | 247204 | 12907321 ~ 12908333 (-) | True | G51809 |
| TU64825 | lncRNA | upstream | 260428 | 12920545 ~ 12920791 (-) | True | G51811 |
| TU64876 | lncRNA | upstream | 263087 | 12923204 ~ 12924656 (-) | True | G51851 |
| TU64906 | lncRNA | upstream | 361907 | 13022024 ~ 13023104 (-) | True | G51875 |
| TU64988 | lncRNA | upstream | 475615 | 13135732 ~ 13136309 (-) | False | AMCG00008844 |
| AMCG00008818 | mRNA | downstream | 4539 | 12653613 ~ 12653945 (-) | True | AMCG00008818 |
| AMCG00008817 | mRNA | downstream | 6666 | 12641987 ~ 12651818 (-) | True | AMCG00008817 |
| AMCG00008815 | mRNA | downstream | 53224 | 12601291 ~ 12605260 (-) | True | AMCG00008815 |
| AMCG00008802 | mRNA | downstream | 399153 | 12248300 ~ 12259331 (-) | True | AMCG00008802 |
| AMCG00008801 | mRNA | downstream | 418425 | 12237425 ~ 12240059 (-) | True | AMCG00008801 |
| AMCG00008816 | mRNA | upstream | 5718 | 12665835 ~ 12668432 (-) | True | AMCG00008816 |
| AMCG00008822 | mRNA | upstream | 57000 | 12717117 ~ 12721189 (-) | True | AMCG00008822 |
| AMCG00008823 | mRNA | upstream | 65407 | 12725524 ~ 12735479 (-) | True | AMCG00008823 |
| AMCG00008821 | mRNA | upstream | 79056 | 12739173 ~ 12745962 (-) | True | AMCG00008821 |
| AMCG00008827 | mRNA | upstream | 186890 | 12847007 ~ 12856225 (-) | True | AMCG00008827 |
| TU64350 | other | downstream | 1332125 | 11320810 ~ 11326359 (-) | False | AMCG00008777 |
| TU64340 | other | downstream | 1362734 | 11235642 ~ 11295750 (-) | False | AMCG00008777 |
| TU64128 | other | downstream | 1859330 | 10797632 ~ 10799154 (-) | True | G51250 |
| TU64105 | other | downstream | 1945999 | 10680278 ~ 10712485 (-) | False | G51241 |
| TU64811 | other | upstream | 230694 | 12890811 ~ 12891597 (-) | True | G51797 |
| TU64813 | other | upstream | 235218 | 12895335 ~ 12897134 (-) | True | G51799 |
| TU64897 | other | upstream | 340709 | 13000826 ~ 13001888 (-) | True | G51867 |
| TU64926 | other | upstream | 430420 | 13090537 ~ 13097934 (-) | True | AMCG00008845 |
| TU65001 | other | upstream | 597589 | 13257706 ~ 13261822 (-) | True | AMCG00008853 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00043347 | True | 620 | mRNA | 0.45 | 2 | NC_007134.7 | 36308717 ~ 36309569 (+) |
| rainbow trout (Oncorhynchus mykiss) | TU1680195 | True | 2174 | lncRNA | 0.43 | 2 | NC_048581.1 | 58260275 ~ 58262588 (-) |
| eurasian perch (Perca fluviatilis) | TU305676 | True | 290 | lncRNA | 0.49 | 2 | NC_053134.1 | 2953407 ~ 2953726 (+) |
| striped catfish (Pangasianodon hypophthalmus) | TU305676 | False | 1686 | lncRNA | 0.40 | 2 | NC_047610.1 | 20518425 ~ 20520203 (-) |
