RNA id: TU65130



Basic Information


Item Value
RNA id TU65130
length 229
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G52044
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 13476750 ~ 13476978 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gtttactctgtgtttattgtgtttactctgtgtttactctgtgtttattgtgtttactctgtgtttattgtgtttactctgtgtttactctgtgtttattgtgtgtttattgtgtttactctgtgtttaccctgtatttattgtgtttactctgtgtttactgtgtgtttattgtgtttactctgtgtttactctgtgtttattgtgtttactctgtgtttactctgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65030 lncRNA upstream 161698 13313590 ~ 13315052 (+) True G51970
TU65029 lncRNA upstream 164292 13311329 ~ 13312458 (+) True G51969
TU65028 lncRNA upstream 165977 13309616 ~ 13310773 (+) True G51968
TU64982 lncRNA upstream 219110 13253814 ~ 13257640 (+) True G51939
TU64940 lncRNA upstream 289611 13140563 ~ 13187139 (+) True G51904
TU65199 lncRNA downstream 209861 13686839 ~ 13687780 (+) True G52100
TU65363 lncRNA downstream 651509 14128487 ~ 14128691 (+) True G52234
TU65529 lncRNA downstream 1065661 14542639 ~ 14545754 (+) True G52361
TU65532 lncRNA downstream 1075918 14552896 ~ 14553241 (+) True G52364
TU65540 lncRNA downstream 1083741 14560719 ~ 14561249 (+) True G52372
AMCG00008863 mRNA upstream 37125 13434457 ~ 13439625 (+) True AMCG00008863
AMCG00008862 mRNA upstream 45509 13387407 ~ 13431241 (+) True AMCG00008862
AMCG00008854 mRNA upstream 99048 13368598 ~ 13377702 (+) True AMCG00008854
AMCG00008855 mRNA upstream 110645 13355405 ~ 13366105 (+) True AMCG00008855
AMCG00008857 mRNA upstream 129388 13333765 ~ 13347362 (+) True AMCG00008857
AMCG00008867 mRNA downstream 40685 13517663 ~ 13534601 (+) True AMCG00008867
AMCG00008868 mRNA downstream 95548 13572526 ~ 13582004 (+) True AMCG00008868
AMCG00008871 mRNA downstream 140073 13617051 ~ 13628477 (+) True AMCG00008871
AMCG00008870 mRNA downstream 152195 13629173 ~ 13638246 (+) True AMCG00008870
AMCG00008875 mRNA downstream 207590 13684568 ~ 13685905 (+) True AMCG00008875
TU65027 other upstream 167320 13306732 ~ 13309430 (+) False AMCG00008856
TU64983 other upstream 219110 13254178 ~ 13257640 (+) False G51939
TU64968 other upstream 251804 13222320 ~ 13224946 (+) True G51928
TU64845 other upstream 484258 12980804 ~ 12992492 (+) True AMCG00008837
TU64826 other upstream 549956 12925238 ~ 12926794 (+) True G51812
TU65505 other downstream 1004943 14481921 ~ 14483255 (+) True G52349
TU65523 other downstream 1050840 14527818 ~ 14540958 (+) False AMCG00008910
TU65601 other downstream 1315191 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other downstream 1315366 14792344 ~ 14794972 (+) False AMCG00008920
TU65619 other downstream 1330319 14807297 ~ 14809286 (+) False AMCG00008919

Expression Profile