Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU65199 |
| length | 942 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G52100 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 13686839 ~ 13687780 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016812 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides | molecular_function |
| id | description |
|---|---|
| ko04610 | Complement and coagulation cascades |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65130 | lncRNA | upstream | 209861 | 13476750 ~ 13476978 (+) | True | G52044 |
| TU65030 | lncRNA | upstream | 371787 | 13313590 ~ 13315052 (+) | True | G51970 |
| TU65029 | lncRNA | upstream | 374381 | 13311329 ~ 13312458 (+) | True | G51969 |
| TU65028 | lncRNA | upstream | 376066 | 13309616 ~ 13310773 (+) | True | G51968 |
| TU64982 | lncRNA | upstream | 429199 | 13253814 ~ 13257640 (+) | True | G51939 |
| TU65363 | lncRNA | downstream | 440707 | 14128487 ~ 14128691 (+) | True | G52234 |
| TU65529 | lncRNA | downstream | 854859 | 14542639 ~ 14545754 (+) | True | G52361 |
| TU65532 | lncRNA | downstream | 865116 | 14552896 ~ 14553241 (+) | True | G52364 |
| TU65540 | lncRNA | downstream | 872939 | 14560719 ~ 14561249 (+) | True | G52372 |
| TU65542 | lncRNA | downstream | 874665 | 14562445 ~ 14562710 (+) | True | G52374 |
| AMCG00008875 | mRNA | upstream | 934 | 13684568 ~ 13685905 (+) | True | AMCG00008875 |
| AMCG00008870 | mRNA | upstream | 48593 | 13629173 ~ 13638246 (+) | True | AMCG00008870 |
| AMCG00008871 | mRNA | upstream | 58362 | 13617051 ~ 13628477 (+) | True | AMCG00008871 |
| AMCG00008868 | mRNA | upstream | 104835 | 13572526 ~ 13582004 (+) | True | AMCG00008868 |
| AMCG00008867 | mRNA | upstream | 152238 | 13517663 ~ 13534601 (+) | True | AMCG00008867 |
| AMCG00008877 | mRNA | downstream | 987 | 13688767 ~ 13720249 (+) | True | AMCG00008877 |
| AMCG00008876 | mRNA | downstream | 47194 | 13734974 ~ 13738084 (+) | True | AMCG00008876 |
| AMCG00008880 | mRNA | downstream | 127645 | 13815425 ~ 13823056 (+) | True | AMCG00008880 |
| AMCG00008885 | mRNA | downstream | 211511 | 13899291 ~ 13904755 (+) | True | AMCG00008885 |
| AMCG00008886 | mRNA | downstream | 218522 | 13906302 ~ 13921627 (+) | True | AMCG00008886 |
| TU65027 | other | upstream | 377409 | 13306732 ~ 13309430 (+) | False | AMCG00008856 |
| TU64983 | other | upstream | 429199 | 13254178 ~ 13257640 (+) | False | G51939 |
| TU64968 | other | upstream | 461893 | 13222320 ~ 13224946 (+) | True | G51928 |
| TU64845 | other | upstream | 694347 | 12980804 ~ 12992492 (+) | True | AMCG00008837 |
| TU64826 | other | upstream | 760045 | 12925238 ~ 12926794 (+) | True | G51812 |
| TU65505 | other | downstream | 794141 | 14481921 ~ 14483255 (+) | True | G52349 |
| TU65523 | other | downstream | 840038 | 14527818 ~ 14540958 (+) | False | AMCG00008910 |
| TU65601 | other | downstream | 1104389 | 14792169 ~ 14794972 (+) | False | AMCG00008920 |
| TU65600 | other | downstream | 1104564 | 14792344 ~ 14794972 (+) | False | AMCG00008920 |
| TU65619 | other | downstream | 1119517 | 14807297 ~ 14809286 (+) | False | AMCG00008919 |
