RNA id: TU65363



Basic Information


Item Value
RNA id TU65363
length 205
lncRNA type intronic
GC content 0.52
exon number 1
gene id G52234
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14128487 ~ 14128691 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGGCAGTTCAGGgaagaaaatatagaaacagAGTCAAACCAGATGCCAAGTAGAGAGTGCCAGTCCATGATCCAGTCCGCTCCCCATTAGCAGAGGTCCTCTTCAAAAGACTCGGAGCTGGGATACGCAGACAACTTTATTACCTCGCCCTCTCGCTTGCACGTCCCTGGGCTGAGTGGTCCGTCTGAAAAAAAGGATCTCCCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65199 lncRNA upstream 440707 13686839 ~ 13687780 (+) True G52100
TU65130 lncRNA upstream 651509 13476750 ~ 13476978 (+) True G52044
TU65030 lncRNA upstream 813435 13313590 ~ 13315052 (+) True G51970
TU65029 lncRNA upstream 816029 13311329 ~ 13312458 (+) True G51969
TU65028 lncRNA upstream 817714 13309616 ~ 13310773 (+) True G51968
TU65529 lncRNA downstream 413948 14542639 ~ 14545754 (+) True G52361
TU65532 lncRNA downstream 424205 14552896 ~ 14553241 (+) True G52364
TU65540 lncRNA downstream 432028 14560719 ~ 14561249 (+) True G52372
TU65542 lncRNA downstream 433754 14562445 ~ 14562710 (+) True G52374
TU65545 lncRNA downstream 447745 14576436 ~ 14576682 (+) True G52377
AMCG00008892 mRNA upstream 19487 14103351 ~ 14109000 (+) True AMCG00008892
AMCG00008893 mRNA upstream 36083 14089653 ~ 14092404 (+) True AMCG00008893
AMCG00008889 mRNA upstream 114750 14007598 ~ 14013737 (+) True AMCG00008889
AMCG00008888 mRNA upstream 122474 13985171 ~ 14006013 (+) True AMCG00008888
AMCG00008883 mRNA upstream 144857 13957368 ~ 13983630 (+) True AMCG00008883
AMCG00008900 mRNA downstream 14515 14143206 ~ 14144894 (+) True AMCG00008900
AMCG00008899 mRNA downstream 27129 14155820 ~ 14163655 (+) True AMCG00008899
AMCG00008896 mRNA downstream 99026 14227717 ~ 14245887 (+) True AMCG00008896
AMCG00008895 mRNA downstream 121555 14250246 ~ 14253618 (+) True AMCG00008895
AMCG00008897 mRNA downstream 125608 14254299 ~ 14271663 (+) True AMCG00008897
TU65027 other upstream 819057 13306732 ~ 13309430 (+) False AMCG00008856
TU64983 other upstream 870847 13254178 ~ 13257640 (+) False G51939
TU64968 other upstream 903541 13222320 ~ 13224946 (+) True G51928
TU64845 other upstream 1135995 12980804 ~ 12992492 (+) True AMCG00008837
TU64826 other upstream 1201693 12925238 ~ 12926794 (+) True G51812
TU65505 other downstream 353230 14481921 ~ 14483255 (+) True G52349
TU65523 other downstream 399127 14527818 ~ 14540958 (+) False AMCG00008910
TU65601 other downstream 663478 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other downstream 663653 14792344 ~ 14794972 (+) False AMCG00008920
TU65619 other downstream 678606 14807297 ~ 14809286 (+) False AMCG00008919

Expression Profile