RNA id: TU65860



Basic Information


Item Value
RNA id TU65860
length 210
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G52632
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 15282700 ~ 15283545 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGCGGTAAAACGGGCCGTTGCTTTAAGTTTCAACAGAGGTTTCAGATCGATTAAACATGGATTTCTAACGTCACCCCGAAGGAAGGAATAATTGTATCTTGTTGTAATTATTACTCAGGGATTTGTGTTGATTCAGCCCATGGTGTGATGAGAAAGTTTGCAGTGGTCCAATGGGTCAGTGAGGAGGATGCTGGGATGTATAGCGAGGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65856 lncRNA upstream 35509 15246898 ~ 15247191 (+) True G52628
TU65847 lncRNA upstream 45776 15236702 ~ 15236924 (+) True G52619
TU65842 lncRNA upstream 57180 15225045 ~ 15225520 (+) True G52614
TU65797 lncRNA upstream 157199 15124587 ~ 15125501 (+) True G52580
TU65692 lncRNA upstream 255118 15026718 ~ 15027582 (+) True G52493
TU65882 lncRNA downstream 128456 15412001 ~ 15431601 (+) True G52651
TU65931 lncRNA downstream 229990 15513535 ~ 15514018 (+) True G52691
TU65970 lncRNA downstream 344295 15627840 ~ 15703015 (+) True G52717
TU66036 lncRNA downstream 480392 15763937 ~ 15764143 (+) True G52766
TU66055 lncRNA downstream 553440 15836985 ~ 15837809 (+) True G52781
AMCG00008941 mRNA upstream 79747 15182788 ~ 15202953 (+) True AMCG00008941
AMCG00008935 mRNA upstream 146679 15133336 ~ 15136021 (+) True AMCG00008935
AMCG00008936 mRNA upstream 183520 15098166 ~ 15099180 (+) True AMCG00008936
AMCG00008932 mRNA upstream 217692 15050695 ~ 15065008 (+) True AMCG00008932
AMCG00008930 mRNA upstream 237277 15032734 ~ 15045423 (+) True AMCG00008930
AMCG00008947 mRNA downstream 210183 15493728 ~ 15494128 (+) True AMCG00008947
AMCG00008946 mRNA downstream 223765 15507310 ~ 15513137 (+) True AMCG00008946
AMCG00008948 mRNA downstream 234636 15518181 ~ 15519179 (+) True AMCG00008948
AMCG00008949 mRNA downstream 236084 15519629 ~ 15522296 (+) True AMCG00008949
AMCG00008955 mRNA downstream 315786 15599331 ~ 15608308 (+) True AMCG00008955
TU65619 other upstream 473414 14807297 ~ 14809286 (+) False AMCG00008919
TU65601 other upstream 487728 14792169 ~ 14794972 (+) False AMCG00008920
TU65600 other upstream 487728 14792344 ~ 14794972 (+) False AMCG00008920
TU65523 other upstream 741742 14527818 ~ 14540958 (+) False AMCG00008910
TU65505 other upstream 799445 14481921 ~ 14483255 (+) True G52349
TU66074 other downstream 572679 15856224 ~ 15863654 (+) True AMCG00008960
TU66272 other downstream 1078557 16362102 ~ 16362511 (+) True G52942
TU66345 other downstream 1296318 16579863 ~ 16583929 (+) False AMCG00008983
TU66371 other downstream 1388958 16672503 ~ 16673542 (+) True G53028
TU66558 other downstream 2047347 17330892 ~ 17339674 (+) True AMCG00008995

Expression Profile