Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66055 |
| length | 825 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G52781 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 15836985 ~ 15837809 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66036 | lncRNA | upstream | 72842 | 15763937 ~ 15764143 (+) | True | G52766 |
| TU65970 | lncRNA | upstream | 133970 | 15627840 ~ 15703015 (+) | True | G52717 |
| TU65931 | lncRNA | upstream | 322967 | 15513535 ~ 15514018 (+) | True | G52691 |
| TU65882 | lncRNA | upstream | 405384 | 15412001 ~ 15431601 (+) | True | G52651 |
| TU65860 | lncRNA | upstream | 553440 | 15282700 ~ 15283545 (+) | True | G52632 |
| TU66090 | lncRNA | downstream | 42248 | 15880057 ~ 15895419 (+) | True | G52798 |
| TU66093 | lncRNA | downstream | 57621 | 15895430 ~ 15898067 (+) | False | AMCG00008965 |
| TU66120 | lncRNA | downstream | 115239 | 15953048 ~ 15955372 (+) | True | G52817 |
| TU66175 | lncRNA | downstream | 224031 | 16061840 ~ 16063714 (+) | True | G52856 |
| TU66180 | lncRNA | downstream | 247719 | 16085528 ~ 16085843 (+) | True | G52861 |
| AMCG00008954 | mRNA | upstream | 186712 | 15641691 ~ 15650273 (+) | True | AMCG00008954 |
| AMCG00008952 | mRNA | upstream | 196050 | 15633723 ~ 15640935 (+) | True | AMCG00008952 |
| AMCG00008953 | mRNA | upstream | 213582 | 15622818 ~ 15623403 (+) | True | AMCG00008953 |
| AMCG00008955 | mRNA | upstream | 228677 | 15599331 ~ 15608308 (+) | True | AMCG00008955 |
| AMCG00008949 | mRNA | upstream | 314689 | 15519629 ~ 15522296 (+) | True | AMCG00008949 |
| AMCG00008960 | mRNA | downstream | 21755 | 15859564 ~ 15863670 (+) | False | AMCG00008960 |
| AMCG00008965 | mRNA | downstream | 58898 | 15896707 ~ 15910151 (+) | True | AMCG00008965 |
| AMCG00008967 | mRNA | downstream | 93507 | 15931316 ~ 15931979 (+) | True | AMCG00008967 |
| AMCG00008966 | mRNA | downstream | 105348 | 15943157 ~ 15951025 (+) | True | AMCG00008966 |
| AMCG00008970 | mRNA | downstream | 154304 | 15992113 ~ 15992550 (+) | True | AMCG00008970 |
| TU65619 | other | upstream | 1027699 | 14807297 ~ 14809286 (+) | False | AMCG00008919 |
| TU65601 | other | upstream | 1042013 | 14792169 ~ 14794972 (+) | False | AMCG00008920 |
| TU65600 | other | upstream | 1042013 | 14792344 ~ 14794972 (+) | False | AMCG00008920 |
| TU65523 | other | upstream | 1296027 | 14527818 ~ 14540958 (+) | False | AMCG00008910 |
| TU65505 | other | upstream | 1353730 | 14481921 ~ 14483255 (+) | True | G52349 |
| TU66074 | other | downstream | 18415 | 15856224 ~ 15863654 (+) | True | AMCG00008960 |
| TU66272 | other | downstream | 524293 | 16362102 ~ 16362511 (+) | True | G52942 |
| TU66345 | other | downstream | 742054 | 16579863 ~ 16583929 (+) | False | AMCG00008983 |
| TU66371 | other | downstream | 834694 | 16672503 ~ 16673542 (+) | True | G53028 |
| TU66558 | other | downstream | 1493083 | 17330892 ~ 17339674 (+) | True | AMCG00008995 |
