Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66276 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G52946 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 16396280 ~ 16396481 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0006631 | fatty acid metabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66275 | lncRNA | upstream | 26866 | 16369172 ~ 16369414 (+) | True | G52945 |
| TU66263 | lncRNA | upstream | 51602 | 16344256 ~ 16344678 (+) | True | G52933 |
| TU66261 | lncRNA | upstream | 52204 | 16343016 ~ 16344076 (+) | True | G52931 |
| TU66218 | lncRNA | upstream | 76428 | 16311392 ~ 16319852 (+) | True | G52896 |
| TU66212 | lncRNA | upstream | 151337 | 16243537 ~ 16244943 (+) | True | G52890 |
| TU66368 | lncRNA | downstream | 257712 | 16654193 ~ 16654923 (+) | True | G53025 |
| TU66382 | lncRNA | downstream | 283344 | 16679825 ~ 16683932 (+) | False | AMCG00008985 |
| TU66396 | lncRNA | downstream | 334908 | 16731389 ~ 16737398 (+) | True | AMCG00008988 |
| TU66402 | lncRNA | downstream | 350206 | 16746687 ~ 16750798 (+) | True | AMCG00008986 |
| TU66419 | lncRNA | downstream | 439131 | 16835612 ~ 16858245 (+) | True | G53069 |
| AMCG00008972 | mRNA | upstream | 262220 | 16126141 ~ 16134060 (+) | True | AMCG00008972 |
| AMCG00008969 | mRNA | upstream | 341755 | 16052549 ~ 16054525 (+) | True | AMCG00008969 |
| AMCG00008970 | mRNA | upstream | 403730 | 15992113 ~ 15992550 (+) | True | AMCG00008970 |
| AMCG00008966 | mRNA | upstream | 445255 | 15943157 ~ 15951025 (+) | True | AMCG00008966 |
| AMCG00008967 | mRNA | upstream | 464301 | 15931316 ~ 15931979 (+) | True | AMCG00008967 |
| AMCG00008978 | mRNA | downstream | 34336 | 16430817 ~ 16451251 (+) | True | AMCG00008978 |
| AMCG00008981 | mRNA | downstream | 151136 | 16547617 ~ 16558958 (+) | True | AMCG00008981 |
| AMCG00008979 | mRNA | downstream | 164541 | 16561022 ~ 16564235 (+) | True | AMCG00008979 |
| AMCG00008983 | mRNA | downstream | 183382 | 16579863 ~ 16587381 (+) | True | AMCG00008983 |
| AMCG00008982 | mRNA | downstream | 203179 | 16599660 ~ 16602244 (+) | True | AMCG00008982 |
| TU66272 | other | upstream | 33769 | 16362102 ~ 16362511 (+) | True | G52942 |
| TU66074 | other | upstream | 532626 | 15856224 ~ 15863654 (+) | True | AMCG00008960 |
| TU65619 | other | upstream | 1586994 | 14807297 ~ 14809286 (+) | False | AMCG00008919 |
| TU65601 | other | upstream | 1601308 | 14792169 ~ 14794972 (+) | False | AMCG00008920 |
| TU66345 | other | downstream | 183382 | 16579863 ~ 16583929 (+) | False | AMCG00008983 |
| TU66371 | other | downstream | 276022 | 16672503 ~ 16673542 (+) | True | G53028 |
| TU66558 | other | downstream | 934411 | 17330892 ~ 17339674 (+) | True | AMCG00008995 |
| TU66686 | other | downstream | 1332885 | 17729366 ~ 17730660 (+) | True | G53298 |
| TU66780 | other | downstream | 1521185 | 17917666 ~ 17920053 (+) | False | AMCG00009009 |
