Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66499 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G53128 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 17009522 ~ 17009721 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04727 | GABAergic synapse |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66480 | lncRNA | upstream | 50491 | 16958513 ~ 16959031 (+) | True | G53115 |
| TU66419 | lncRNA | upstream | 151277 | 16835612 ~ 16858245 (+) | True | G53069 |
| TU66402 | lncRNA | upstream | 258724 | 16746687 ~ 16750798 (+) | True | AMCG00008986 |
| TU66396 | lncRNA | upstream | 272124 | 16731389 ~ 16737398 (+) | True | AMCG00008988 |
| TU66382 | lncRNA | upstream | 325590 | 16679825 ~ 16683932 (+) | False | AMCG00008985 |
| TU66502 | lncRNA | downstream | 9964 | 17019685 ~ 17019964 (+) | True | G53131 |
| TU66508 | lncRNA | downstream | 37293 | 17047014 ~ 17048098 (+) | True | G53137 |
| TU66510 | lncRNA | downstream | 41752 | 17051473 ~ 17051675 (+) | True | G53139 |
| TU66528 | lncRNA | downstream | 99358 | 17109079 ~ 17109684 (+) | True | G53155 |
| TU66530 | lncRNA | downstream | 102395 | 17112116 ~ 17113008 (+) | True | G53157 |
| AMCG00008990 | mRNA | upstream | 166804 | 16799599 ~ 16842718 (+) | True | AMCG00008990 |
| AMCG00008991 | mRNA | upstream | 210993 | 16798074 ~ 16798529 (+) | True | AMCG00008991 |
| AMCG00008986 | mRNA | upstream | 261129 | 16746687 ~ 16748393 (+) | False | AMCG00008986 |
| AMCG00008988 | mRNA | upstream | 272023 | 16736746 ~ 16737499 (+) | False | AMCG00008988 |
| AMCG00008985 | mRNA | upstream | 283227 | 16683716 ~ 16726295 (+) | True | AMCG00008985 |
| AMCG00008993 | mRNA | downstream | 151364 | 17161085 ~ 17161541 (+) | True | AMCG00008993 |
| AMCG00008995 | mRNA | downstream | 326999 | 17336720 ~ 17343676 (+) | False | AMCG00008995 |
| AMCG00008996 | mRNA | downstream | 413725 | 17423446 ~ 17453217 (+) | True | AMCG00008996 |
| AMCG00008997 | mRNA | downstream | 482760 | 17492481 ~ 17601018 (+) | True | AMCG00008997 |
| AMCG00009003 | mRNA | downstream | 778799 | 17788520 ~ 17796297 (+) | True | AMCG00009003 |
| TU66371 | other | upstream | 335980 | 16672503 ~ 16673542 (+) | True | G53028 |
| TU66345 | other | upstream | 425593 | 16579863 ~ 16583929 (+) | False | AMCG00008983 |
| TU66272 | other | upstream | 647011 | 16362102 ~ 16362511 (+) | True | G52942 |
| TU66074 | other | upstream | 1145868 | 15856224 ~ 15863654 (+) | True | AMCG00008960 |
| TU65619 | other | upstream | 2200236 | 14807297 ~ 14809286 (+) | False | AMCG00008919 |
| TU66558 | other | downstream | 321171 | 17330892 ~ 17339674 (+) | True | AMCG00008995 |
| TU66686 | other | downstream | 719645 | 17729366 ~ 17730660 (+) | True | G53298 |
| TU66780 | other | downstream | 907945 | 17917666 ~ 17920053 (+) | False | AMCG00009009 |
| TU66948 | other | downstream | 1541051 | 18550772 ~ 18553960 (+) | True | G53520 |
| TU67402 | other | downstream | 4158510 | 21168231 ~ 21168575 (+) | True | G53911 |
