RNA id: TU66837



Basic Information


Item Value
RNA id TU66837
length 306
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G53428
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 18131480 ~ 18131785 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TACCTGAGTGTCTTTGAAAGGACTGCGGAGCGAGAGAAATGGCCAAAAGACCAGTGGGCTGGGCTGATCGCACCATTTCTAACGGGGGAAGCACAAAAGACGTACCACGACCTCGAGGCAGAGACAGCACGAGTGTATGACACCCTCAAGGCTGAAATACTGAAACGTATTGGCCTTAACCCGTATGTGAGAGCGCAGCGCTACCATGCCTGGACCTTCCAGAGTGGACAATCATCCAGAGCCCAGATGCATGATCTCATCCGCCTCACCAAGAGATGGCTGCAGCCAGAACAAGGAGGAATTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66834 lncRNA downstream 17842 18102722 ~ 18113638 (-) True G53425
TU66819 lncRNA downstream 46998 18084247 ~ 18084482 (-) True G53411
TU66673 lncRNA downstream 476272 17654125 ~ 17655208 (-) True G53286
TU66564 lncRNA downstream 787698 17343442 ~ 17343782 (-) True G53188
TU66529 lncRNA downstream 1021769 17109061 ~ 17109711 (-) True G53156
TU66903 lncRNA upstream 175652 18307437 ~ 18307999 (-) True G53478
TU66975 lncRNA upstream 469928 18601713 ~ 18601951 (-) True G53543
TU66988 lncRNA upstream 527566 18659351 ~ 18659633 (-) True G53556
TU67000 lncRNA upstream 590325 18722110 ~ 18722374 (-) True G53568
TU67009 lncRNA upstream 703351 18835136 ~ 18835373 (-) True G53577
AMCG00009001 mRNA downstream 389698 17724719 ~ 17741782 (-) True AMCG00009001
AMCG00008999 mRNA downstream 466744 17655595 ~ 17664736 (-) True AMCG00008999
AMCG00009000 mRNA downstream 504697 17615728 ~ 17626783 (-) True AMCG00009000
AMCG00008998 mRNA downstream 520122 17601832 ~ 17611358 (-) True AMCG00008998
AMCG00008994 mRNA downstream 911039 17205090 ~ 17220441 (-) True AMCG00008994
AMCG00009015 mRNA upstream 19078 18150863 ~ 18151365 (-) True AMCG00009015
AMCG00009012 mRNA upstream 44110 18175895 ~ 18208537 (-) True AMCG00009012
AMCG00009013 mRNA upstream 92062 18223847 ~ 18253002 (-) True AMCG00009013
AMCG00009011 mRNA upstream 140833 18272618 ~ 18288172 (-) True AMCG00009011
AMCG00009018 mRNA upstream 245649 18377434 ~ 18382391 (-) True AMCG00009018
TU66751 other downstream 262784 17868386 ~ 17868696 (-) True G53355
TU66702 other downstream 384437 17736589 ~ 17747043 (-) False AMCG00009001
TU66472 other downstream 1218181 16853029 ~ 16913299 (-) False AMCG00008989
TU66358 other downstream 1517019 16613224 ~ 16614461 (-) True G53017
TU66281 other downstream 1726354 16404710 ~ 16405126 (-) True G52951
TU67292 other upstream 2068962 20200747 ~ 20264085 (-) True G53809
TU67291 other upstream 2121119 20252904 ~ 20264085 (-) False G53809
TU67499 other upstream 4051303 22183088 ~ 22183565 (-) True G54003
TU68185 other upstream 7021481 25153266 ~ 25156338 (-) True G54544
TU68195 other upstream 7041892 25173677 ~ 25176378 (-) True AMCG00009100

Expression Profile