RNA id: TU66974



Basic Information


Item Value
RNA id TU66974
length 224
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G53542
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 18601729 ~ 18601952 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agtcataaacaaattcacagcagacatctgtaggctatttcagcactgtgtaatctttcattactgacaggagtctctaacaaatcgaccttgttgaccctttacttgtcctgctaaatctaatctgctcagtctgtatacaaactacttctaatgctagtattaatataaaacattatataattatcacaaaacactttcttcaacatcctatacagagtctt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66952 lncRNA upstream 8213 18593052 ~ 18593516 (+) True G53524
TU66947 lncRNA upstream 17220 18554959 ~ 18584509 (+) True G53519
TU66945 lncRNA upstream 65355 18528343 ~ 18536374 (+) True G53517
TU66923 lncRNA upstream 129452 18420852 ~ 18472277 (+) True G53495
TU66924 lncRNA upstream 171776 18427665 ~ 18429953 (+) True G53496
TU66999 lncRNA downstream 120156 18722108 ~ 18722401 (+) True G53567
TU67004 lncRNA downstream 181196 18783148 ~ 18783749 (+) True G53572
TU67014 lncRNA downstream 325785 18927737 ~ 18928175 (+) True G53581
TU67019 lncRNA downstream 391933 18993885 ~ 19042745 (+) True G53585
TU67072 lncRNA downstream 717829 19319781 ~ 19320284 (+) True G53627
AMCG00009016 mRNA upstream 227461 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 381476 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 560768 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 579410 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009010 mRNA upstream 596988 17976034 ~ 18004741 (+) True AMCG00009010
AMCG00009022 mRNA downstream 942412 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009026 mRNA downstream 1259326 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 1337124 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 1661123 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 1774843 20376795 ~ 20394819 (+) False AMCG00009033
TU66948 other upstream 47769 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 681676 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 871069 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 1262055 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 1928187 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 2566279 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 2672659 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 2690289 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 5281365 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 6210666 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile