RNA id: TU66999


Basic Information

Item Value
RNA id TU66999
length 294
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G53567
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 18722108 ~ 18722401 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

accttgaactcgtgattcatcagaccaggccaccttcttccattgctccatggtccagttctgatgctcacatgcccattgtaggcgctttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattaactttttcagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcactccccacatgcatcaatgag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66974 lncRNA upstream 120156 18601729 ~ 18601952 (+) True G53542
TU66952 lncRNA upstream 128592 18593052 ~ 18593516 (+) True G53524
TU66947 lncRNA upstream 137599 18554959 ~ 18584509 (+) True G53519
TU66945 lncRNA upstream 185734 18528343 ~ 18536374 (+) True G53517
TU66923 lncRNA upstream 249831 18420852 ~ 18472277 (+) True G53495
TU67004 lncRNA downstream 60747 18783148 ~ 18783749 (+) True G53572
TU67014 lncRNA downstream 205336 18927737 ~ 18928175 (+) True G53581
TU67019 lncRNA downstream 271484 18993885 ~ 19042745 (+) True G53585
TU67072 lncRNA downstream 597380 19319781 ~ 19320284 (+) True G53627
TU67075 lncRNA downstream 628852 19351253 ~ 19351461 (+) True G53630
AMCG00009016 mRNA upstream 347840 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 501855 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 681147 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 699789 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009010 mRNA upstream 717367 17976034 ~ 18004741 (+) True AMCG00009010
AMCG00009022 mRNA downstream 821963 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009026 mRNA downstream 1138877 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 1216675 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 1540674 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 1654394 20376795 ~ 20394819 (+) False AMCG00009033
TU66948 other upstream 168148 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 802055 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 991448 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 1382434 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 2048566 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 2445830 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 2552210 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 2569840 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 5160916 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 6090217 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile