RNA id: TU67019



Basic Information


Item Value
RNA id TU67019
length 402
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G53585
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 18993885 ~ 19042745 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atacagtgagggaaaaaagtacttgatcccctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtggctgtgtgttttgggtcattgtcatgatggaatacccatccacgacccattttcaatgccctggctgagggaaggaggttctcacccaagatttgagggtacatggccccgtccatcatccctttgatgtggtgcagttgtcctgtccccttagtagaaaaacacccccaaagcataatgtttccacctccatgttagACGGTGGGTATGGTGTTCTTGGagtcataggcagcattcctcctcctccaaacacggcgagttgagttgatgccaaagagcacgattttggtctca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67014 lncRNA upstream 65710 18927737 ~ 18928175 (+) True G53581
TU67004 lncRNA upstream 210136 18783148 ~ 18783749 (+) True G53572
TU66999 lncRNA upstream 271484 18722108 ~ 18722401 (+) True G53567
TU66974 lncRNA upstream 391933 18601729 ~ 18601952 (+) True G53542
TU66952 lncRNA upstream 400369 18593052 ~ 18593516 (+) True G53524
TU67072 lncRNA downstream 277036 19319781 ~ 19320284 (+) True G53627
TU67075 lncRNA downstream 308508 19351253 ~ 19351461 (+) True G53630
TU67076 lncRNA downstream 308790 19351535 ~ 19351799 (+) True G53631
TU67090 lncRNA downstream 446338 19489083 ~ 19489284 (+) True G53645
TU67100 lncRNA downstream 485152 19527897 ~ 19547421 (+) True AMCG00009022
AMCG00009016 mRNA upstream 619617 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 773632 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 952924 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 971566 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009010 mRNA upstream 989144 17976034 ~ 18004741 (+) True AMCG00009010
AMCG00009022 mRNA downstream 501619 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009026 mRNA downstream 818533 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 896331 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 1220330 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 1334050 20376795 ~ 20394819 (+) False AMCG00009033
TU66948 other upstream 439925 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 1073832 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 1263225 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 1654211 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 2320343 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 2125486 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 2231866 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 2249496 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 4840572 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 5769873 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile