RNA id: TU67075



Basic Information


Item Value
RNA id TU67075
length 209
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G53630
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19351253 ~ 19351461 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tctttgtgatttaacgaaaacaaaatacttaacgtcaaataaacaagtgcacaaaacaacaaaacaaacgtgattaaagcaaaactgctaccaacaaaaggtcaaatacattgataataactgaaaatgcactggacaaaataaaaaaacaattaaaaaggtaaaaataaaaaacaaacaaaaaaggtccaatgcatttaaaattaaat

Function


GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05033 Nicotine addiction

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67072 lncRNA upstream 30969 19319781 ~ 19320284 (+) True G53627
TU67019 lncRNA upstream 308508 18993885 ~ 19042745 (+) True G53585
TU67014 lncRNA upstream 423078 18927737 ~ 18928175 (+) True G53581
TU67004 lncRNA upstream 567504 18783148 ~ 18783749 (+) True G53572
TU66999 lncRNA upstream 628852 18722108 ~ 18722401 (+) True G53567
TU67076 lncRNA downstream 74 19351535 ~ 19351799 (+) True G53631
TU67090 lncRNA downstream 137622 19489083 ~ 19489284 (+) True G53645
TU67100 lncRNA downstream 176436 19527897 ~ 19547421 (+) True AMCG00009022
TU67113 lncRNA downstream 225859 19577320 ~ 19577907 (+) True G53663
TU67126 lncRNA downstream 330513 19681974 ~ 19682227 (+) True G53675
AMCG00009016 mRNA upstream 976985 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 1131000 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 1310292 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 1328934 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009010 mRNA upstream 1346512 17976034 ~ 18004741 (+) True AMCG00009010
AMCG00009022 mRNA downstream 192903 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009026 mRNA downstream 509817 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 587615 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 911614 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 1025334 20376795 ~ 20394819 (+) False AMCG00009033
TU66948 other upstream 797293 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 1431200 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 1620593 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 2011579 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 2677711 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 1816770 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 1923150 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 1940780 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 4531856 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 5461157 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile