RNA id: TU67076



Basic Information


Item Value
RNA id TU67076
length 265
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G53631
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19351535 ~ 19351799 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaacaactaaatctttaaaaacagttaaaattcatttttaaaagtcattttaaaatcaatcattcataaaatagttaaaagatcttggactcgggctccagcagggggaactgaccgtccccggaggtgggtcccatcatgggatcctgagctcccccagatcttgtatatgccagttcttataggcttcctccttgcccctctgatggacctccagattgacgtagtccctCACAAGCACCATGCCCCTCCGCACGATGACaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67075 lncRNA upstream 74 19351253 ~ 19351461 (+) True G53630
TU67072 lncRNA upstream 31251 19319781 ~ 19320284 (+) True G53627
TU67019 lncRNA upstream 308790 18993885 ~ 19042745 (+) True G53585
TU67014 lncRNA upstream 423360 18927737 ~ 18928175 (+) True G53581
TU67004 lncRNA upstream 567786 18783148 ~ 18783749 (+) True G53572
TU67090 lncRNA downstream 137284 19489083 ~ 19489284 (+) True G53645
TU67100 lncRNA downstream 176098 19527897 ~ 19547421 (+) True AMCG00009022
TU67113 lncRNA downstream 225521 19577320 ~ 19577907 (+) True G53663
TU67126 lncRNA downstream 330175 19681974 ~ 19682227 (+) True G53675
TU67156 lncRNA downstream 468780 19820579 ~ 19820929 (+) True G53695
AMCG00009016 mRNA upstream 977267 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 1131282 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 1310574 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 1329216 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009010 mRNA upstream 1346794 17976034 ~ 18004741 (+) True AMCG00009010
AMCG00009022 mRNA downstream 192565 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009026 mRNA downstream 509479 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 587277 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 911276 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 1024996 20376795 ~ 20394819 (+) False AMCG00009033
TU66948 other upstream 797575 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 1431482 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 1620875 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 2011861 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 2677993 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 1816432 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 1922812 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 1940442 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 4531518 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 5460819 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile