RNA id: TU67090



Basic Information


Item Value
RNA id TU67090
length 202
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G53645
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19489083 ~ 19489284 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTGTGCTGTTGTTGGTAAGCCTGGCTGCATCGCCtaagtattgtattatattctgttaAATCGCATCTATATACTAGGATCGTAATGTTGTCTATTTATAGGGCAAGACTGGGTGGCGCATTTCGCATCCTGGCTGTGGCTGCCCGAGgtcaatgttttattctctttagTGATGTTAAGCAGTTGCATTTGAGAtctgaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67076 lncRNA upstream 137284 19351535 ~ 19351799 (+) True G53631
TU67075 lncRNA upstream 137622 19351253 ~ 19351461 (+) True G53630
TU67072 lncRNA upstream 168799 19319781 ~ 19320284 (+) True G53627
TU67019 lncRNA upstream 446338 18993885 ~ 19042745 (+) True G53585
TU67014 lncRNA upstream 560908 18927737 ~ 18928175 (+) True G53581
TU67100 lncRNA downstream 38613 19527897 ~ 19547421 (+) True AMCG00009022
TU67113 lncRNA downstream 88036 19577320 ~ 19577907 (+) True G53663
TU67126 lncRNA downstream 192690 19681974 ~ 19682227 (+) True G53675
TU67156 lncRNA downstream 331295 19820579 ~ 19820929 (+) True G53695
TU67167 lncRNA downstream 470289 19959573 ~ 19960355 (+) True G53706
AMCG00009016 mRNA upstream 1114815 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 1268830 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 1448122 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 1466764 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009010 mRNA upstream 1484342 17976034 ~ 18004741 (+) True AMCG00009010
AMCG00009022 mRNA downstream 55080 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009026 mRNA downstream 371994 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 449792 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 773791 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 887511 20376795 ~ 20394819 (+) False AMCG00009033
TU66948 other upstream 935123 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 1569030 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 1758423 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 2149409 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 2815541 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 1678947 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 1785327 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 1802957 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 4394033 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 5323334 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile