RNA id: TU67126



Basic Information


Item Value
RNA id TU67126
length 254
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G53675
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 19681974 ~ 19682227 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


cagacagtctcaacaactctaagttacatttggtattttatgggttgtgttcAAGGCAGAGAAGATGGTTATTTCCTTCTTGATAggtgcaaacaagcttactaagcaaattgtaactaattaacaagagacatttaaattacttactacatagactttatgaatgaataacctcttggtcaaggatgccaactcagcaagttttgttaaacaacaagatgtagtgaaacaacagaatacagagccttagagat

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU67113 lncRNA upstream 104067 19577320 ~ 19577907 (+) True G53663
TU67100 lncRNA upstream 134553 19527897 ~ 19547421 (+) True AMCG00009022
TU67090 lncRNA upstream 192690 19489083 ~ 19489284 (+) True G53645
TU67076 lncRNA upstream 330175 19351535 ~ 19351799 (+) True G53631
TU67075 lncRNA upstream 330513 19351253 ~ 19351461 (+) True G53630
TU67156 lncRNA downstream 138352 19820579 ~ 19820929 (+) True G53695
TU67167 lncRNA downstream 277346 19959573 ~ 19960355 (+) True G53706
TU67179 lncRNA downstream 301642 19983869 ~ 19985883 (+) True G53711
TU67238 lncRNA downstream 347067 20029294 ~ 20030004 (+) True G53762
TU67240 lncRNA downstream 347929 20030156 ~ 20030431 (+) True G53764
AMCG00009022 mRNA upstream 134467 19544364 ~ 19547507 (+) False AMCG00009022
AMCG00009016 mRNA upstream 1307706 18361526 ~ 18374268 (+) True AMCG00009016
AMCG00009014 mRNA upstream 1461721 18219072 ~ 18220253 (+) True AMCG00009014
AMCG00009006 mRNA upstream 1641013 18036794 ~ 18040961 (+) True AMCG00009006
AMCG00009008 mRNA upstream 1659655 18013706 ~ 18022319 (+) True AMCG00009008
AMCG00009026 mRNA downstream 179051 19861278 ~ 19915906 (+) True AMCG00009026
AMCG00009025 mRNA downstream 256849 19939076 ~ 19949435 (+) True AMCG00009025
AMCG00009032 mRNA downstream 580848 20263075 ~ 20263866 (+) True AMCG00009032
AMCG00009033 mRNA downstream 694568 20376795 ~ 20394819 (+) False AMCG00009033
AMCG00009034 mRNA downstream 774230 20456457 ~ 20461014 (+) True AMCG00009034
TU66948 other upstream 1128014 18550772 ~ 18553960 (+) True G53520
TU66780 other upstream 1761921 17917666 ~ 17920053 (+) False AMCG00009009
TU66686 other upstream 1951314 17729366 ~ 17730660 (+) True G53298
TU66558 other upstream 2342300 17330892 ~ 17339674 (+) True AMCG00008995
TU66371 other upstream 3008432 16672503 ~ 16673542 (+) True G53028
TU67402 other downstream 1486004 21168231 ~ 21168575 (+) True G53911
TU67406 other downstream 1592384 21274611 ~ 21275354 (+) True G53915
TU67408 other downstream 1610014 21292241 ~ 21293901 (+) True G53917
TU67814 other downstream 4201090 23883317 ~ 23975906 (+) True G54263
TU68049 other downstream 5130391 24812618 ~ 24816534 (+) True AMCG00009085

Expression Profile


TU67126 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
End of interactive chart.

TU67126 Expression in each Bioproject

Bar chart with 7 bars.
TU67126 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 175.
End of interactive chart.